ggKbase home page

cn_combo_scaffold_5445_24

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 16380..17540

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWK6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 378.0
  • Bit_score: 497
  • Evalue 1.30e-137
ThiJ/PfpI domain protein similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 381.0
  • Bit_score: 510
  • Evalue 5.40e-142
Transcriptional regulator {ECO:0000313|EMBL:KGD96984.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 379.0
  • Bit_score: 510
  • Evalue 2.00e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGCGTCGTCGGTTGGTTCTTTGGAGTGGCTTGAGCGTTGCGATCCTTCTGGCTATCGGGACCGGCTGGATGGTTTCCCTGCCGTCGGCTCCTACTGCCACAAGGACCCAGCCAGTTCCACAGGCCGAAGTCGATGCCACCTTGGCGGCGCTGAAGCCGCCGAAGCGCGCGCGTCCGGTCGTGGCGATTATCGGCATCAACGACGGCACCGAGACCACCGACTATCTGATGCCTTACGGCATTCTGCGCCGCGCCGACATTGCCGATGTGATTGCGCTCGCGACCTCGCCCGGTCCGGTAGCACTCTATCCGGCGTTGAAAGTCGAGCCCGACGGCACCATTGCCGATTTCGACGCCCGTCATCCCGACGGCGCCGACTACGTGATCGTGCCGGCGATGCATCGCGACGATGATCCGGCAGCATTGCGGTGGATCCAGCAGCAGGCGGCGAAAGGCGCAATCATCGTCGGCATCTGCGCCGGCGCCAAGGTCGTCGGCGCCGCCGGACTGCTCGACGGTCGGCAGGCCACAACGCATTGGTACTATCGCGACCAGTTGCTGAAGCGACACCCGTCGGTTCGTTTCGTTCCTGACCGGCGGTTCGTGGTCGACCGCGGCGTTGCCACGACGACTGGCGTCAGCGCGTCGATGCCGATGTCGCTCACGCTGATCGAGGCGATCGCGGGACGCGGCAAGGCCGAACAGATGGCGCGCGAACTGGGAGTCGCAAGCTGGGATGCGCAGCACGACAGCAGCATCTTCGTCTTTACGCGGCCTTTTGCCTTGACTGCGATCGGCAATACCCTCGCCTTCTGGAAGCGCGAAACCCTCGGCATTTCGCTCGGGTCCGGCGTCGACGAAGTATCGCTGGCTCTGGTCGCCGATGCCTGGTCCCGAACCTATCGGTCGCACGTCGTCACCGTCGCCGACCAGGCACGGCCCCTTCGGAGCCGCAGCGGTCTTGGCATTCTGCCCGACCTGGTCGCGACGTCCCGGCCGACGGATGGGATGCTCGACTCCGCGGTCGCACACCGTCCCGTTTCAGCCTTGAACGAAACGCTGCAAGCAATCGCCGGTCGCTATCGGGTGGACACCGCCAACCTCGTCGCCATGCAGCTCGAATACTCGAGACAGGCTGCGTCAGGGGAGCCTCGGGAATGA
PROTEIN sequence
Length: 387
MRRRLVLWSGLSVAILLAIGTGWMVSLPSAPTATRTQPVPQAEVDATLAALKPPKRARPVVAIIGINDGTETTDYLMPYGILRRADIADVIALATSPGPVALYPALKVEPDGTIADFDARHPDGADYVIVPAMHRDDDPAALRWIQQQAAKGAIIVGICAGAKVVGAAGLLDGRQATTHWYYRDQLLKRHPSVRFVPDRRFVVDRGVATTTGVSASMPMSLTLIEAIAGRGKAEQMARELGVASWDAQHDSSIFVFTRPFALTAIGNTLAFWKRETLGISLGSGVDEVSLALVADAWSRTYRSHVVTVADQARPLRSRSGLGILPDLVATSRPTDGMLDSAVAHRPVSALNETLQAIAGRYRVDTANLVAMQLEYSRQAASGEPRE*