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cn_combo_scaffold_8168_7

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 4889..6106

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 389.0
  • Bit_score: 320
  • Evalue 3.20e-84
Extracellular ligand-binding receptor id=3298093 bin=GWF2_Methylomirabilis_70_14 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 30.1
  • Coverage: 395.0
  • Bit_score: 193
  • Evalue 3.20e-46
livK; branched-chain amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 26.3
  • Coverage: 373.0
  • Bit_score: 126
  • Evalue 1.80e-26

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCAACGATTGTCCCGAAGGGGTTTGCTGGCGAGTCTGGTGATGGCGTCGGGCTTCGCGGCCTTGCCCGTGGTCGCCGAGGAGACCATCAAAATTGGCGTGCCGATGGAACTCAGTGGGCGCTTTGTTGCCTATGGCGCCTCCGGAAAGCGAGGTGTTGAGTACGCGGTGGAGATCTACGGCGGCAAGGTTGCTGGCAAGAAGATCGAATTGCTTGTCCGCGACGTGCAGTCCGAGTCCCAGGCCACCATCACGGTGTTCAACGAGTTGGTGTTGAAGGAAAAGCTGAACTACATCATCGGGCCCATCGCCAGCCCAACCGTCGCGGCCGCCATCCCGACCTGGCGTCAGGCCAAGCCCATCTGGCTCGTCCCTGGCTCGAGCAGCACGAAGCTCGAGGACGAGGCCGGCTCGGAGCTGCAGTTTTTCCACACGTTTCCCTATGCGTATCACTACCACTCGAGCATCGCCGAGATGCTCAAGAGCCAGCTTCCGCCGGGCCAGAAGGTTGCAATCGTCTATTCCGACGACAACTACGGGCGCACGCACCAACCGTATGCCAAGAAATATCTGACGGAGGCGGGCTTCGAGATCGTGGCCGAGGAGATTGTCCGAACCAACGCGGCTGACATGAACCCGCTTCTCACCAAGATCGCGCGGGTCAAGCCCGACATCTTGCTGGGTTTGGTCCAGACAACTGATGCGGTGACGCTCGCGAAGCAGATCCACACGCGAAAGCTTCGTGTGCCGTATCTGGTGGGTACCGCCGCGACGCAGCTCGAAGAGTGGCAGAAGTCAGTCGGTGCTGCCCAGGAAGGCTGGATTGGTGTCACCACCTATTTGCCCGGCTTGAATCGGCCCGGAAACAAGGATCTCGCCAACCTGTTTCCGCCGAGTGACGAGTGGGAAGCCGCGTTTGTCAAAAGATATGGCCGGGAGCCGGACTTCGAGGATGCGGGCTGCTATGTGACCGCCATGAGTCTGTTGCTGGCAATCGAGCGGGCGGGGGTTGACGACAAGGAAAAGGTCGCCGCGGAGCTGAGAAAGACGGATATCCAGAACACGCTTCTTGGTGTGGCCAGGTTCGTAGAGACCCCAAGCGGCACCAAGCAGCAGGCGTTCACCGACATGGTTGTCTTTCAGCGTCGCGATGGCAAGAACGCGATGCTCTTCCCGCCCGGACCTGCAACCGTTCCCATCGAGGCTGTGAAATTCTGA
PROTEIN sequence
Length: 406
MQRLSRRGLLASLVMASGFAALPVVAEETIKIGVPMELSGRFVAYGASGKRGVEYAVEIYGGKVAGKKIELLVRDVQSESQATITVFNELVLKEKLNYIIGPIASPTVAAAIPTWRQAKPIWLVPGSSSTKLEDEAGSELQFFHTFPYAYHYHSSIAEMLKSQLPPGQKVAIVYSDDNYGRTHQPYAKKYLTEAGFEIVAEEIVRTNAADMNPLLTKIARVKPDILLGLVQTTDAVTLAKQIHTRKLRVPYLVGTAATQLEEWQKSVGAAQEGWIGVTTYLPGLNRPGNKDLANLFPPSDEWEAAFVKRYGREPDFEDAGCYVTAMSLLLAIERAGVDDKEKVAAELRKTDIQNTLLGVARFVETPSGTKQQAFTDMVVFQRRDGKNAMLFPPGPATVPIEAVKF*