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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27..1034)
DNA (1008bp) protein (336aa)
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037DA78E
glycerol-3-phosphate dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glycerol-3-phosphate dehydrogenase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1290..1760)
DNA (471bp) protein (157aa)
Protein-export protein SecB n=2 Tax=Methylovorus RepID=C6X9I2_METSD
protein-export protein SecB; K03071 preprotein translocase subunit SecB Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
protein-export protein SecB
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1802..2059)
DNA (258bp) protein (86aa)
Glutaredoxin 3 n=1 Tax=Burkholderia sp. H160 RepID=B5WP65_9BURK
glutaredoxin 3; K03676 glutaredoxin 3 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glutaredoxin 3
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2059..2472)
DNA (414bp) protein (138aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003637DEF
Rhodanese domain protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Rhodanese domain protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2591..2959)
DNA (369bp) protein (123aa)
Putative transcriptional regulator n=1 Tax=Beggiatoa alba B18LD RepID=I3CG99_9GAMM
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
arsR family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3076..4656
DNA (1581bp) protein (527aa)
phosphoglycerate mutase; K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DF54_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4758..5876
DNA (1119bp) protein (373aa)
Peptidase M23 n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BV10_9GAMM
peptidase M23 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidase M23
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6158..7504
DNA (1347bp) protein (449aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidase S41 n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037AF3A0
carboxyl-terminal protease
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7516..8070
DNA (555bp) protein (185aa)
putative protease; K03152 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative protease id=1354808 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8191..9066)
DNA (876bp) protein (292aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9136..10794)
DNA (1659bp) protein (553aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-); K03688 ubiquinone biosynthesis protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI000368425E
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10791..11393)
DNA (603bp) protein (201aa)
Sterol-binding domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVA3_NITHN
sterol-binding domain-containing protein; K03690 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
sterol-binding domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11513..12274)
DNA (762bp) protein (254aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I376_GRIHO
ubiquinone/menaquinone biosynthesis methyltransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12281..12661)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000366826C
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12801..13490
DNA (690bp) protein (230aa)
Two-component system response regulator PhoB n=1 Tax=Aeromonas molluscorum 848 RepID=R1F7T7_9GAMM
two component transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
two component transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13494..14816
DNA (1323bp) protein (441aa)
PAS/PAC sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curate
Histidine kinase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZH50_9PSED
PAS/PAC sensor signal transduction histidine kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14958..15416
DNA (459bp) protein (153aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Arsenate reductase ArsC n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3Q6_9GAMM
protein tyrosine phosphatase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15572..16582
DNA (1011bp) protein (337aa)
Phosphate ABC transporter periplasmic phosphate-binding protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NPP7_GLOVI
phosphate ABC transporter periplasmic phosphate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphate ABC transporter periplasmic phosphate-binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16761..17675
DNA (915bp) protein (305aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA32_NITMU
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphate ABC transporter permease
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17752..18660
DNA (909bp) protein (303aa)
Phosphate ABC transporter, permease protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G6S3_9CYAN
pstA; phosphate ABC transporter, membrane protein PstA; K02038 phosphate transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphate ABC transporter membrane protein 2, PhoT family
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18672..19523
DNA (852bp) protein (284aa)
phosphate ABC transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Phosphate import ATP-binding protein PstB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PSTB_NITMU
phosphate ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19544..20263
DNA (720bp) protein (240aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Methylophaga lonarensis MPL RepID=M7P0U9_9GAMM
Phosphate transport system regulatory protein PhoU; K02039 phosphate transport system protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Phosphate transport system regulatory protein PhoU
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20304..20483
DNA (180bp) protein (60aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20519..20932
DNA (414bp) protein (138aa)
thioredoxin n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003707B86
thioredoxin Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
thioredoxin
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21006..21881
DNA (876bp) protein (292aa)
Hsp33 protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAP0_9PROT
Hsp33 protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Hsp33 protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22210..24030
DNA (1821bp) protein (607aa)
GTP-binding protein TypA n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWC9_NITHN
GTP-binding protein TypA; K06207 GTP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
GTP-binding protein TypA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24539..25345
DNA (807bp) protein (269aa)
hypothetical protein; K15984 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=RSMJ_THISH
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25353..26108
DNA (756bp) protein (252aa)
ribosomal RNA small subunit methyltransferase E; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003725C52
ribosomal RNA small subunit methyltransferase E
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26427..26786)
DNA (360bp) protein (120aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2405_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26959..27795)
DNA (837bp) protein (279aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z667_AZOL4
hypothetical protein; K07115 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
Displaying items 1-30 of 36 in total

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