ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_1
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

3..470
-----------------
DNA (468bp)
protein (156aa)
recombinase Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Recombinase id=2823704 bin=GWC1_OD1_38_17 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
recombinase
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_2
GWC2_OD1_37_9_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

698..1453
-----------------
DNA (756bp)
protein (252aa)
Lipoprotein ylpA n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJT6_9BACT
Lipoprotein ylpA {ECO:0000313|EMBL:KKQ46635.1}; TaxID=1619028 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_37_9.;"
ylpA; Lipoprotein ylpA
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_3
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

1552..2163
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003798683
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=GWA1_OD1_43_15
acyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_4
GWC2_OD1_37_9_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2228..2473)
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ46633.1}; TaxID=1619028 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_37_9.;"
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_5
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(2460..2717)
-----------------
DNA (258bp)
protein (86aa)
Tax=GWA1_OD1_43_15
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_6
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(2727..3479)
-----------------
DNA (753bp)
protein (251aa)
Tax=GWA1_OD1_43_15
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_7
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(3560..3700)
-----------------
DNA (141bp)
protein (47aa)
Tax=GWA1_OD1_43_15
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_8

Not on your lists

comp(3687..5045)
-----------------
DNA (1359bp)
protein (453aa)
Radical SAM domain protein {ECO:0000313|EMBL:KKT62775.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
Radical SAM domain-containing protein id=4575849 bin=GWC2_Planctomycete_KSU_39_26 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
radical SAM domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_9
GWC2_OD1_37_9_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5408..5605
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ46629.1}; TaxID=1619028 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_37_9.;"
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_10
GWC2_OD1_37_9_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5646..6239)
-----------------
DNA (594bp)
protein (198aa)
Methyltransferase type 12 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5I6_9CHLR
Methyltransferase type 12 {ECO:0000313|EMBL:KKQ46628.1}; TaxID=1619028 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_37_9.;"
type 12 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_11
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

6367..7395
-----------------
DNA (1029bp)
protein (343aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. CAG:571 RepID=R5XMA7_9CLOT
Radical SAM domain protein Tax=GWA1_OD1_43_15
radical SAM protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_12

Not on your lists

7507..7614
-----------------
DNA (108bp)
protein (36aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT62789.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_13
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

7673..8347
-----------------
DNA (675bp)
protein (225aa)
Tax=GWA1_OD1_43_15
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_14

Not on your lists

comp(8410..8562)
-----------------
DNA (153bp)
protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT62780.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_15

Not on your lists

comp(8580..9923)
-----------------
DNA (1344bp)
protein (448aa)
Radical SAM domain protein {ECO:0000313|EMBL:KKT62781.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
radical SAM domain protein id=89219 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_16
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

10100..10309
-----------------
DNA (210bp)
protein (70aa)
Epimerase family protein YfhF Tax=GWA1_OD1_43_15
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_17
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

10369..10518
-----------------
DNA (150bp)
protein (50aa)
Tax=GWA1_OD1_43_15
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_18
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(10565..10999)
-----------------
DNA (435bp)
protein (145aa)
Tax=GWA1_OD1_43_15
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_19
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

11121..12083
-----------------
DNA (963bp)
protein (321aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8E1_SORCE
RimK2 protein Tax=GWA1_OD1_43_15
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_20
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

12151..12723
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein XcampvN_06032 Tax=GWA1_OD1_43_15
hypothetical protein id=13310 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_21
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

13109..14038
-----------------
DNA (930bp)
protein (310aa)
RimK domain protein ATP-grasp Tax=GWA1_OD1_43_15
RimK protein
RimK domain-containing protein ATP-grasp id=725348 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_22
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

14105..14623
-----------------
DNA (519bp)
protein (173aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ENB0_9BACT
Uncharacterized protein Tax=GWA1_OD1_43_15
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_8826_23
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

14691..15083
-----------------
DNA (393bp)
protein (131aa)
short-chain dehydrogenase n=1 Tax=Bacillus oceanisediminis RepID=UPI0002FA0376
Uncharacterized protein Tax=GWA1_OD1_43_15
nad-dependent epimerase/dehydratase
Displaying 23 items

View Taxonomy