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RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_1476_23

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_43_160

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(16514..17665)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein Tax=GWA1_OD1_43_15 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 383.0
  • Bit_score: 752
  • Evalue 2.40e-214
RNA binding S1 domain protein id=2933970 bin=GWC1_OD1_38_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 389.0
  • Bit_score: 383
  • Evalue 2.70e-103
rpfA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 352.0
  • Bit_score: 272
  • Evalue 1.90e-70

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Taxonomy

GWA1_OD1_43_15 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGCGAATTTAGCTATGGAAAAAGATATTAAGCCGAATAACGGCATAATGGACGCTTTGCTTAAAGCGCGGCCGAAGGTTTTTCTTAAAATCGGCGATTTAATTGAGGGCTGTGTGCTGGAGCGGGAAGGCGCCAAAGTGTTTTTGGATTTGGGAATTTTCGGCACCGGCATCATCTACGGCCAGGAATATCAAAACGCGCGGGAGCTTATTAAAAATCTGAAACCGGAAGATAAGGTAACGGCAAAAATCGTGGAACTTGAAAATGAAAACGGCTTCGTTGAGCTTTCATTGAAAGAAGCGGGCTCGGAAATGATTTGGAAAGAAGCTAAAGAGCTGAAGGGTTCGCAGGAAGCTTTGAATTTGAAAGTTTTGGAAGCCAACAAAGGCGGCGTGGTTTTGGAATGGCGCGGCATCAAAGGATTTCTGCCGGCGTCGCAACTCAAAGCGTCCCACTACCCGCGAGTTGAGAATGGCGAGAAAGAAAAAATTTTTGACGAGCTTAGAAAATTGGTTGGAGAGGCTATCTCCGTCACCATTTTGGATTTTGACCCCAAAGAAAACAAACTTATTTTTTCAGAAAAAGGCGCGGAGTCAGAAGATTTGAAAAAAGTCGTGGGAAAATACAAAGTCGGCGACATTATTGAGGGAGAAGTTACCGGCGTGGTTGATTTCGGAATATTTATAAAATTAGAGGAAGGGCTGGAGGGGCTCGCCCACATCTCGGAGCTGGATTGGGCTTTGGTGGAAAACCCCAACGCGCTTTTTAAAGTCGGTGAACAAATAAAAGCTAAAATAATTTCAATAGACGGAGACAAAATTTCACTTTCAGTGAAAGCCTTAAAGCCGGACCCCTGGGAAACGCACAAAGAAAAATATAAAAAAGGCGATATTGTGGAAGGAAAAGTTTTGCGTTTAAATAAATTCGGCGCGCTGATAACTTTGGACACCGGCATCTACGGACTCGCCCATATTTCGGAATTCGGCACGGAGAAAAAAATGCGCGAGATGGTTTTGGCCGGCGAGTCATATTTTTTCCAGATAGTGAACTATAAACCGGAAGATAAAAAACTTTCGCTTTCGTTTCTCGGGAAAAAAGGCGAAGCGCCTGTGGCTCCGAAAGAGGAAGTGCAAGAAAATCAGGAAAAATAA
PROTEIN sequence
Length: 384
MANLAMEKDIKPNNGIMDALLKARPKVFLKIGDLIEGCVLEREGAKVFLDLGIFGTGIIYGQEYQNARELIKNLKPEDKVTAKIVELENENGFVELSLKEAGSEMIWKEAKELKGSQEALNLKVLEANKGGVVLEWRGIKGFLPASQLKASHYPRVENGEKEKIFDELRKLVGEAISVTILDFDPKENKLIFSEKGAESEDLKKVVGKYKVGDIIEGEVTGVVDFGIFIKLEEGLEGLAHISELDWALVENPNALFKVGEQIKAKIISIDGDKISLSVKALKPDPWETHKEKYKKGDIVEGKVLRLNKFGALITLDTGIYGLAHISEFGTEKKMREMVLAGESYFFQIVNYKPEDKKLSLSFLGKKGEAPVAPKEEVQENQEK*