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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

216..1562
-----------------
DNA (1347bp)
protein (449aa)
sugar transferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
sugar transferase id=2482486 bin=GWA2_CPR4_42_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
sugar transferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1697..2608
-----------------
DNA (912bp)
protein (304aa)
UDP-glucose 4-epimerase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Conserved domain protein id=2482487 bin=GWA2_CPR4_42_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
UDP-glucose 4-epimerase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3002..4321
-----------------
DNA (1320bp)
protein (440aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD id=5803713 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
protein-export membrane protein SecD
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4475..5416
-----------------
DNA (942bp)
protein (314aa)
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Protein translocase subunit SecF id=2482491 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Protein translocase subunit SecF
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5336..5545)
-----------------
DNA (210bp)
protein (70aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5710..6042
-----------------
DNA (333bp)
protein (111aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6027..6308
-----------------
DNA (282bp)
protein (94aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6325..8490)
-----------------
DNA (2166bp)
protein (722aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=5803096 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ATP-dependent DNA helicase RecG
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9150..9602
-----------------
DNA (453bp)
protein (151aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9738..10199
-----------------
DNA (462bp)
protein (154aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10382..10771)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein
id=5103514 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=5103514 bin=GW2011_AR20_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10955..11485)
-----------------
DNA (531bp)
protein (177aa)
Plastocyanin Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Plastocyanin id=5084537 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11737..13209)
-----------------
DNA (1473bp)
protein (491aa)
similar to dolichyl-phosphate-mannose--protein mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Dolichyl-phosphate-mannose-protein mannosyltransferase, putative id=2130211 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
dolichyl-phosphate-mannose--protein O-mannosyl transferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13548..13964
-----------------
DNA (417bp)
protein (139aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
NUDIX hydrolase id=5227251 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
NUDIX hydrolase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13995..16043
-----------------
DNA (2049bp)
protein (683aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 338 str. F0234 RepID=F0IGB6_9FLAO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16396..16593
-----------------
DNA (198bp)
protein (66aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16630..16824
-----------------
DNA (195bp)
protein (65aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16830..16967
-----------------
DNA (138bp)
protein (46aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17055..18626
-----------------
DNA (1572bp)
protein (524aa)
IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.1); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=15189302 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19231..19599)
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EMH4_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

19686..20087
-----------------
DNA (402bp)
protein (134aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21156..21629)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_23
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21631..21879)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A0A1_9BACT
hypothetical protein; K08982 putative membrane protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

22070..22651
-----------------
DNA (582bp)
protein (194aa)
Recombinase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Recombinase id=4948379 bin=GWA2_Elusimicrobia_56_46 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_25
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(22667..22927)
-----------------
DNA (261bp)
protein (87aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(23464..24132)
-----------------
DNA (669bp)
protein (223aa)
phosphoribosyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
competence protein F; K02242 competence protein ComFC id=5803087 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
phosphoribosyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24074..24217)
-----------------
DNA (144bp)
protein (48aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

24334..25503
-----------------
DNA (1170bp)
protein (390aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ftsA; cell division protein FtsA
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(25623..25736)
-----------------
DNA (114bp)
protein (38aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_2797_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

25800..26489
-----------------
DNA (690bp)
protein (230aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transmembrane_regions id=5227303 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying items 1-30 of 64 in total

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