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RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_1
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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3..1850
-----------------
DNA (1848bp)
protein (616aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B0FAE
Alanine--tRNA ligase Tax=GWA2_OD1_47_10b
Alanine-tRNA ligase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_2
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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1850..2995
-----------------
DNA (1146bp)
protein (382aa)
hypothetical protein Tax=GWA2_OD1_47_10b
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_3
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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2999..4228
-----------------
DNA (1230bp)
protein (410aa)
hypothetical protein Tax=GWA2_OD1_47_10b
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_4
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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4277..4492
-----------------
DNA (216bp)
protein (72aa)
Translation initiation factor IF-1 Tax=GWA2_OD1_47_10b
Translation initiation factor IF-1 id=2161409 bin=GWA2_CPR4_42_17 species=unknown genus=unknown taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
translation initiation factor IF-1
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_5
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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4674..5060
-----------------
DNA (387bp)
protein (129aa)
SSU ribosomal protein S13p (S18e) {ECO:0000313|EMBL:KKU53002.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
30S ribosomal protein S13 id=4241945 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S13
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_6
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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5062..5496
-----------------
DNA (435bp)
protein (145aa)
Ribosomal protein S11 Tax=GWA2_OD1_47_10b
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5803406 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
SSU ribosomal protein S11p (S14e)
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_7
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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5502..6110
-----------------
DNA (609bp)
protein (203aa)
30S ribosomal protein S4 A Tax=GWA2_OD1_47_10b
ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=119980 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
30S ribosomal protein S4
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_8
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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6120..7082
-----------------
DNA (963bp)
protein (321aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=5803408 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_9
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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7086..7436
-----------------
DNA (351bp)
protein (117aa)
50S ribosomal protein L17 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AI45_IGNAJ
50S ribosomal protein L17 Tax=GWA2_OD1_47_10b
50S ribosomal protein L17
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_10
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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7381..7788
-----------------
DNA (408bp)
protein (136aa)
50S ribosomal protein L13 n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1E5_DESAP
50S ribosomal protein L13 Tax=GWA2_OD1_47_10b
50S ribosomal protein L13
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_11
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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7772..8179
-----------------
DNA (408bp)
protein (136aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9 {ECO:0000313|EMBL:KKU53008.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
rpsI; 30S ribosomal protein S9
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_12
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(8217..9119)
-----------------
DNA (903bp)
protein (301aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_13
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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9266..9925
-----------------
DNA (660bp)
protein (220aa)
Transcriptional regulator of heat shock gene n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2634 id=16557 bin=ACD1 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Transcriptional regulator of heat shock gene Tax=GWA2_OD1_47_10b
Transcriptional regulator of heat shock protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_14
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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9895..10437
-----------------
DNA (543bp)
protein (181aa)
Protein GrpE Tax=GWA2_OD1_47_10b
GrpE protein; K03687 molecular chaperone GrpE id=5803413 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GrpE protein HSP-70 cofactor
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_15
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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10453..12357
-----------------
DNA (1905bp)
protein (635aa)
Chaperone protein DnaK {ECO:0000313|EMBL:KKU85513.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
molecular chaperone DnaK
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_16
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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12326..13273
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_17
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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13270..14325
-----------------
DNA (1056bp)
protein (352aa)
Chaperone protein DnaJ Tax=GWA2_OD1_47_10b
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
dnaJ; chaperone protein DnaJ
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_18
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(14346..14525)
-----------------
DNA (180bp)
protein (60aa)
hypothetical protein Tax=GWA2_OD1_47_10b
Uncharacterised protein family PGPGW, transmembrane id=5801687 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_19
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(14530..15537)
-----------------
DNA (1008bp)
protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU85517.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Putative uncharacterized protein id=1916078 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_5750_20
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(15534..18251)
-----------------
DNA (2718bp)
protein (906aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DUL3_9BACT
ATPase Tax=GWA2_OD1_47_10b
P-type HAD superfamily ATPase
Displaying 20 items

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