ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_2

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_47_79

partial RP 38 / 55 MC: 1 BSCG 38 / 51 ASCG 6 / 38
Location: comp(288..1496)

Top 3 Functional Annotations

Value Algorithm Source
Type 4 fimbrial assembly protein pilC {ECO:0000313|EMBL:KKU86435.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 402.0
  • Bit_score: 769
  • Evalue 2.50e-219
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227297 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 400.0
  • Bit_score: 388
  • Evalue 1.10e-104
pilC; type 4 fimbrial assembly protein pilC similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 400.0
  • Bit_score: 277
  • Evalue 6.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWA1_47_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGCTTTATAACTATCAGGCACGCACTCATGAAGGACTGACGCGCTCGGGGTCGGTAGAGGCGCCGTCGGTTGATGCCGCAATCCAGATGTTGCAGAGACAGAATCTTTTTGTTTTACAGCTTGAGTCCGCGGTAAAACGTCTCCCCTGGTATCAACTGCCGCTCGCGCGTTTTCACGGCGTCGGGCAAAAAGAGGTCATGCTTCTCGCGCGGCAGCTCTCGACACTTTTTGAAGCAAAAGTTCCAGTCGTGCAGACGTTTCGGACGCTGATTGGCCAGTCCGGTTCCCGCGGGATGCAACAGCACCTGACGGAAGTGCTCGATGATGTTCAGGGGGGTATGAGCATGTCGCAGGCGATGGGTAAGCATCCGACCGTTTTCTCAAATTTTTTCGTGAATATGGTTCGATCGGGAGAAGAGTCAGGAAAACTCGACAGTGTTTTTAACTACCTTGCCGATTACCTTGAGCGAAATTATATTCTTCTCACGAAAACGCGAAACGCCATGATATATCCTGCGTTCATTCTTGTCGCGTTCATCGGCGTTGTCGTTATGCTCCTCACGGTTGTTATTCCAAAACTGACGCTCATTATTAAAGAAGCAGGTCAAGAACTTCCCATTTATACAAGAATTGTCATCGGAACGAGCGAGTTTTTGCGAAGTTTTGGCGTTTTTATACTTTTATTGATTCTGGGGGTTATTGTTGTACTCTTTCAATATTTGAAAACTCCTGAAGGGAGGCGCGCGTGGAGCCGCACGCAGATTACCATACCGATTATTGGGATTCTTTTTCAAAAACTTTATCTTGCGCGCCTCGCGGATAATCTTCAGACGTTGATTGCCGGGGGTATCCCAATTGTGCGTTCGCTCCAGATTACTGCCGATGTGGTTGGTAATGAGATTTACCGCGGCATTGTTCTCGAGGCGATAGAAGCGGTGCGCGGCGGAAGTACTATCGCCGATGCTTTTGAAAAACACCCTGAAATTCCACCGCTTTTGACCCAAATGATGCGGGTCGGAGAAGAAACGGGCAAGCTCGACCAGATTTTGAGGGCGCTCGCGCGGTTTTATTCGCGCGAGGTAGATAGTCTTATTGACAACTTGGTATCCCTTATTGAACCGCTCCTCATTCTTATTTTAGGCGTCGGTATTGGCCTTATTGTTGCGTCTGTTCTGGTGCCGATATATAACTTGACACAGGCATTTTAA
PROTEIN sequence
Length: 403
MLYNYQARTHEGLTRSGSVEAPSVDAAIQMLQRQNLFVLQLESAVKRLPWYQLPLARFHGVGQKEVMLLARQLSTLFEAKVPVVQTFRTLIGQSGSRGMQQHLTEVLDDVQGGMSMSQAMGKHPTVFSNFFVNMVRSGEESGKLDSVFNYLADYLERNYILLTKTRNAMIYPAFILVAFIGVVVMLLTVVIPKLTLIIKEAGQELPIYTRIVIGTSEFLRSFGVFILLLILGVIVVLFQYLKTPEGRRAWSRTQITIPIIGILFQKLYLARLADNLQTLIAGGIPIVRSLQITADVVGNEIYRGIVLEAIEAVRGGSTIADAFEKHPEIPPLLTQMMRVGEETGKLDQILRALARFYSREVDSLIDNLVSLIEPLLILILGVGIGLIVASVLVPIYNLTQAF*