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gwc1_scaffold_60

Alias: GWC1_OD1_45_14_1

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_60_1
GWC1_OD1_45_14, Parcubacteria, Bacteria

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comp(3..377)
-----------------
DNA (375bp)
protein (125aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWC1_OD1_45_14
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] alias=ACD7_121.17578.78G0011,ACD7_121.17578.78_11,ACD7_C00115G00011 id=130864 tax=ACD7 species=Staphylococcus epidermidis genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
tRNA delta(2)-isopentenylpyrophosphate transferase
gwc1_scaffold_60_2
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(344..1708)
-----------------
DNA (1365bp)
protein (455aa)
hor:Hore_11680 RNA modification enzyme, MiaB family (EC:1.3.1.74); K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=GWC1_OD1_45_14
hor:Hore_11680 RNA modification enzyme, MiaB family (EC:1.3.1.74); K06168 bifunctional enzyme involved in thiolation and methylation of tRNA alias=ACD11_C00007G00026,ACD11_4234.67825.30G0026,ACD11_4234.67825.30_26 id=2877 tax=ACD11 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
MiaB family RNA modification protein
gwc1_scaffold_60_3
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(1799..2569)
-----------------
DNA (771bp)
protein (257aa)
yqxC; putative rRNA methyltransferase (EC:2.1.1.-)
Hemolysin A Tax=GWC1_OD1_45_14
Hemolysin A
gwc1_scaffold_60_4
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(2624..4381)
-----------------
DNA (1758bp)
protein (586aa)
ttr:Tter_0121 threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=GWC1_OD1_45_14
ttr:Tter_0121 threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] alias=ACD8_4779.32180.18G0021,ACD8_4779.32180.18_21,ACD8_C00024G00021 id=137128 tax=ACD8 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
thrS; threonyl-tRNA synthetase
gwc1_scaffold_60_5
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

4538..4753
-----------------
DNA (216bp)
protein (72aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_60_6
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(4750..8292)
-----------------
DNA (3543bp)
protein (1181aa)
DNA polymerase III DnaE, DNA polymerase III subunit alpha {ECO:0000313|EMBL:KKT95442.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KKT95442.1};; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacte
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
pth:PTH_2220 dnaE; DNA polymerase III DnaE (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] alias=ACD11_C00007G00034,ACD11_4234.67825.30G0034,ACD11_4234.67825.30_34 id=2860 tax=ACD11 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_7
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(8820..8984)
-----------------
DNA (165bp)
protein (55aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_60_8
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

9033..9746
-----------------
DNA (714bp)
protein (238aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWC1_OD1_45_14
rnhB; ribonuclease HII (EC:3.1.26.4)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] alias=ACD5_31908.55529.9G0015,ACD5_31908.55529.9_15,ACD5_C00006G00015 id=88102 tax=ACD5 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_9
GWC1_OD1_45_14, Parcubacteria, Bacteria

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9908..10114
-----------------
DNA (207bp)
protein (69aa)
seg 5..19 Tax=GWC1_OD1_45_14
rpmF; 50S ribosomal protein L32
seg 5..19 alias=ACD11_C00007G00036,ACD11_4234.67825.30G0036,ACD11_4234.67825.30_36 id=2881 tax=ACD11 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_10
GWC1_OD1_45_14, Parcubacteria, Bacteria

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10234..10707
-----------------
DNA (474bp)
protein (158aa)
nusB; N utilization substance protein B; K03625 N utilization substance protein B Tax=GWC1_OD1_45_14
putative transcription termination factor
nusB; N utilization substance protein B; K03625 N utilization substance protein B alias=ACD11_C00007G00037,ACD11_4234.67825.30G0037,ACD11_4234.67825.30_37 id=2882 tax=ACD11 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_11
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

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10829..11512
-----------------
DNA (684bp)
protein (228aa)
RNAse III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] alias=ACD11_C00007G00038,ACD11_4234.67825.30G0038,ACD11_4234.67825.30_38 id=2883 tax=ACD11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
Ribonuclease 3 {ECO:0000313|EMBL:KKT86961.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
Ribonuclease 3
gwc1_scaffold_60_12
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(11410..11637)
-----------------
DNA (228bp)
protein (76aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_60_13
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

11776..13371
-----------------
DNA (1596bp)
protein (532aa)
sus:Acid_0057 dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWC1_OD1_45_14
sus:Acid_0057 dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] alias=ACD11_C00007G00039,ACD11_4234.67825.30G0039,ACD11_4234.67825.30_39 id=2884 tax=ACD11 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes organism_group=OD1-i organism_desc=OD1-i
amidohydrolase
gwc1_scaffold_60_14
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

13499..14896
-----------------
DNA (1398bp)
protein (466aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) Tax=GWC1_OD1_45_14
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) alias=ACD11_C00007G00040,ACD11_4234.67825.30G0040,ACD11_4234.67825.30_40 id=2885 tax=ACD11 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylmuramoylalanine--D-glutamate ligase
gwc1_scaffold_60_15
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

15647..16915
-----------------
DNA (1269bp)
protein (423aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase, UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:KKT95451.1}; EC=2.5.1.7 {ECO:0000313|EMBL:KKT95451.1};; TaxID=1618915 species="Ba
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] alias=ACD11_C00007G00041,ACD11_4234.67825.30G0041,ACD11_4234.67825.30_41 id=2886 tax=ACD11 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
gwc1_scaffold_60_16
GWC1_OD1_45_14, Parcubacteria, Bacteria

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16980..17681
-----------------
DNA (702bp)
protein (234aa)
Metal dependent phosphohydrolase Tax=GWC1_OD1_45_14
putative domain HDIG domain-containing protein
Metal dependent phosphohydrolase
gwc1_scaffold_60_17
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

17742..18749
-----------------
DNA (1008bp)
protein (336aa)
Rod shape-determining protein mreB {ECO:0000313|EMBL:KKT88133.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
MreB/Mrl family cell shape determining protein
sti:Sthe_2367 cell shape determining protein, MreB/Mrl family; K03569 rod shape-determining protein MreB and related proteins alias=ACD11_C00007G00042,ACD11_4234.67825.30G0042,ACD11_4234.67825.30_42 id=2887 tax=ACD11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_18
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

18753..19853
-----------------
DNA (1101bp)
protein (367aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT88132.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
putative glycosyltransferase
group 1 glycosyl transferase alias=ACD15_54917.2395.4G0002,ACD15_54917.2395.4_2,ACD15_C00092G00002 id=9354 tax=ACD15 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_19
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

19900..21015
-----------------
DNA (1116bp)
protein (372aa)
Glycosyl transferase group 1 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZ18_9FIRM alias=ACD11_C00007G00044,ACD11_4234.67825.30G0044,ACD11_4234.67825.30_44 id=2847 tax=ACD11 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
Glycosyl transferase group 1 Tax=GWC1_OD1_45_14
mannosyl transferase
gwc1_scaffold_60_20
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

21039..21938
-----------------
DNA (900bp)
protein (300aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=GWC1_OD1_45_14
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] alias=ACD11_C00007G00045,ACD11_4234.67825.30G0045,ACD11_4234.67825.30_45 id=2879 tax=ACD11 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_21
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

21949..22899
-----------------
DNA (951bp)
protein (317aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_60_22
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(22960..24786)
-----------------
DNA (1827bp)
protein (609aa)
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KKT95458.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
glycosyl transferase family protein
4-amino-4-deoxy-L-arabinose transferase alias=ACD11_C00007G00047,ACD11_4234.67825.30G0047,ACD11_4234.67825.30_47 id=2853 tax=ACD11 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_23
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(24943..26508)
-----------------
DNA (1566bp)
protein (522aa)
Glycosyl transferase family 39 {ECO:0000313|EMBL:KKT95459.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
hypothetical protein
glycosyl transferase family 39 alias=ACD11_C00007G00048,ACD11_4234.67825.30G0048,ACD11_4234.67825.30_48 id=2865 tax=ACD11 species=Cyanothece sp. PCC 7424 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_60_24
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

26676..30245
-----------------
DNA (3570bp)
protein (1190aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_60_25
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

30268..30579
-----------------
DNA (312bp)
protein (104aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_60_26
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

30644..31093
-----------------
DNA (450bp)
protein (150aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_60_27
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

31127..33604
-----------------
DNA (2478bp)
protein (826aa)
UniRef90_A5KS42 Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT alias=ACD11_C00007G00052,ACD11_4234.67825.30G0052,ACD11_4234.67825.30_52 id=2837 tax=ACD11 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKT89582.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
hypothetical protein
gwc1_scaffold_60_28
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(33734..36025)
-----------------
DNA (2292bp)
protein (764aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT95464.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
gwc1_scaffold_60_29
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

36301..36906
-----------------
DNA (606bp)
protein (202aa)
Putative transcriptional regulator, PaaX family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5I5_9BACT alias=ACD11_C00007G00054,ACD11_4234.67825.30G0054,ACD11_4234.67825.30_54 id=2848 tax=ACD11 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKT95465.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
gwc1_scaffold_60_30
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

36979..38103
-----------------
DNA (1125bp)
protein (375aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT89585.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
hypothetical protein
protein of unknown function DUF195; K09760 DNA recombination protein RmuC alias=ACD11_C00007G00055,ACD11_4234.67825.30G0055,ACD11_4234.67825.30_55 id=2855 tax=ACD11 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
Displaying items 1-30 of 133 in total

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