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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2054_3

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(1293..1676)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=1890656 bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 247
  • Evalue 7.60e-63
rpoD; RNA polymerase sigma factor rpod; K03086 RNA polymerase primary sigma factor Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 247
  • Evalue 1.10e-62
RpoD family RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 127.0
  • Bit_score: 227
  • Evalue 2.30e-57

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Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGAAATCCCCTTGGATAAGGTGCGCAAGGTCCTGAAGATCGCCAAGGAGCCGATCTCCCTGGAAACCCCCGTGGGCGAGGAAGAGGACAGTCATTTAGGTGATTTCATCGAAGACAAGCGGATCATCACGCCCGCGGACGCGGTGGTCAACATCAATCTGCAGGAGCAGACCAAGAAAGTGTTGGCGACTTTAACTCCGCGCGAAGAGCAAGTCCTGAGGATGCGTTTTGGGATCGGGGAAAAGTCGGATCATACCCTCGAAGAGGTGGGGCAAAAATTTACCGTTACGCGCGAACGCATCCGCCAGATCGAGGCCAAGGCGCTGCGCAAGCTCAGACATCCCAGTCGCAGCAAGAGGCTGAAGAGTTTCATGGAAAGCTGA
PROTEIN sequence
Length: 128
MEIPLDKVRKVLKIAKEPISLETPVGEEEDSHLGDFIEDKRIITPADAVVNINLQEQTKKVLATLTPREEQVLRMRFGIGEKSDHTLEEVGQKFTVTRERIRQIEAKALRKLRHPSRSKRLKSFMES*