ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_11

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: 10270..10692

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein id=2009886 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 141.0
  • Bit_score: 257
  • Evalue 1.10e-65
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 140.0
  • Bit_score: 243
  • Evalue 1.70e-61
ssb; ssDNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 157.0
  • Bit_score: 165
  • Evalue 1.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGTCGGTTAATAAAGCAATCCTTATCGGCAATCTCGGCAAAGATCCTGAAGTGCGCTTTACCGCTAATGGCAAGGCAGTGGCGCGCTTTTCCATCGCCACTTCCGAAGTTTGGAATGACGCCGAAGGCAACCGGCAGGAGAGGACTGAGTGGCACAACATCGTAGTCTGGGGAAAGCAGGGGGAAAGCTGCGGCCAATATCTGGCCAAGGGTAGGCAGGTGTATGTGGAGGGGAGCATTCGCAGTCGCACCTACGACGACAAGAGCGGCAACAAGCGGTACATAACCGAGATTGTAGCTCAAAGAGTCAGATTCTTAGGTGGCGGCGGTGGAACCCGCGTCGCGACGGAGCCGGAnnnnnnnnnnnnnnnnnnnnnnnnnTCCGGCCAGCCCCCGCCGTTGGACGACGATATCCCGTTTTAA
PROTEIN sequence
Length: 141
MSVNKAILIGNLGKDPEVRFTANGKAVARFSIATSEVWNDAEGNRQERTEWHNIVVWGKQGESCGQYLAKGRQVYVEGSIRSRTYDDKSGNKRYITEIVAQRVRFLGGGGGTRVATEPXXXXXXXXXSGQPPPLDDDIPF*