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RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_1
Thiomonas delicata, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..87)
-----------------
DNA (87bp)
protein (29aa)
Elongation factor Tu (EF-Tu) (P-43) n=1 Tax=mine drainage metagenome RepID=E6PK11_9ZZZZ
translation elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=364030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_trna_3
unknown

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comp(143..214)
-----------------
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_trna_2
unknown

Not on your lists

comp(230..300)
-----------------
DNA (71bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_trna_1
unknown

Not on your lists

comp(364..445)
-----------------
DNA (82bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_2
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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849..1058
-----------------
DNA (210bp)
protein (70aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1070..1723
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZHH6_9RHOO
Gram-negative bacterial tonB protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Gram-negative bacterial tonB protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1793..2596
-----------------
DNA (804bp)
protein (268aa)
flagellar motor protein MotA n=1 Tax=Methyloversatilis universalis RepID=UPI00035DB708
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
biopolymer transporter ExbB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2606..3025
-----------------
DNA (420bp)
protein (140aa)
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
biopolymer transporter ExbD
Putative biopolymer transport protein id=1349955 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3115..5301
-----------------
DNA (2187bp)
protein (729aa)
Putative TonB-denpendent receptor n=1 Tax=Thauera sp. 27 RepID=N6Y619_9RHOO
putative TonB-denpendent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
putative TonB-denpendent receptor
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5321..6091
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=1 Tax=Thauera sp. 27 RepID=N6XZV1_9RHOO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6084..6221
-----------------
DNA (138bp)
protein (46aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6560..7585)
-----------------
DNA (1026bp)
protein (342aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase id=1859920 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7720..8610)
-----------------
DNA (891bp)
protein (297aa)
phosphoribulokinase (EC:2.7.1.19); K00855 phosphoribulokinase [EC:2.7.1.19] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase id=1915006 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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8803..11604
-----------------
DNA (2802bp)
protein (934aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
leuS; leucine--tRNA ligase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI000375C025
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11734..12219
-----------------
DNA (486bp)
protein (162aa)
Rare lipoprotein B; K03643 LPS-assembly lipoprotein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Rare lipoprotein B id=1915001 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Rare lipoprotein B
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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12223..13224
-----------------
DNA (1002bp)
protein (334aa)
DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit id=1914997 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_14
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13221..13550
-----------------
DNA (330bp)
protein (110aa)
Divalent cation tolerance protein n=1 Tax=Thauera sp. 63 RepID=N6XXW1_9RHOO
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
CutA1 divalent ion tolerance protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13554..15467
-----------------
DNA (1914bp)
protein (638aa)
Cytochrome C biogenesis protein transmembrane region; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Thiol:disulfide interchange protein DsbD n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPT1_SIDLE
Cytochrome C biogenesis protein transmembrane region
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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15532..15969
-----------------
DNA (438bp)
protein (146aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE49_GALCS
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15986..16435
-----------------
DNA (450bp)
protein (150aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE50_GALCS
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
acetyl-CoA carboxylase, biotin carboxyl carrier protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16583..17938
-----------------
DNA (1356bp)
protein (452aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE52_GALCS
acetyl-CoA carboxylase, biotin carboxylase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17938..18831
-----------------
DNA (894bp)
protein (298aa)
50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Ribosomal protein L11 methyltransferase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE53_GALCS
50S ribosomal protein L11 methyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18833..19711
-----------------
DNA (879bp)
protein (293aa)
MJ0042 family finger-like protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE54_GALCS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_21
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19936..20505
-----------------
DNA (570bp)
protein (190aa)
glutamine amidotransferase of anthranilate synthase; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Glutamine amidotransferase of anthranilate synthase id=1859861 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
glutamine amidotransferase of anthranilate synthase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_22
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20577..21734)
-----------------
DNA (1158bp)
protein (386aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Putative uncharacterized protein id=1910432 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_23
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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21779..22519
-----------------
DNA (741bp)
protein (247aa)
short-chain dehydrogenase/reductase SDR; K03793 pteridine reductase [EC:1.5.1.33] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Short-chain dehydrogenase/reductase SDR id=1910434 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_24
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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22532..23392
-----------------
DNA (861bp)
protein (287aa)
PP-loop domain protein; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
tRNA 2-thiocytidine biosynthesis protein TtcA id=1910436 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
PP-loop domain protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_25
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23432..23893)
-----------------
DNA (462bp)
protein (154aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein id=12494165 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_26
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23933..25108)
-----------------
DNA (1176bp)
protein (392aa)
Diguanylate cyclase n=1 Tax=Pseudomonas sp. Chol1 RepID=K5XJP1_9PSED
diguanylate cyclase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
diguanylate cyclase domain-containing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2286_27
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25119..26456)
-----------------
DNA (1338bp)
protein (446aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Peptidase U32 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CU80_SIDLE
peptidase U32
Displaying items 1-30 of 59 in total

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