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RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_20003_2

Organism: Nitrospinae bacterium RIFCSPLOWO2_02_FULL_39_110

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38
Location: comp(3219..4466)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXF0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 429.0
  • Bit_score: 255
  • Evalue 7.00e-65
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 415.0
  • Bit_score: 814
  • Evalue 7.10e-233
sigA; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 399.0
  • Bit_score: 254
  • Evalue 4.40e-65

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Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAACAGAGAATCGGCCCCATTAAAGGAAATTGAGGGGATAAAACTCCTTCTGATTAAGGGGAAAAAGAAAGGCTCCCTCACTTATGAAGAAATTGGTGAGGTGTTTGATGGGAAAGCTGTCTGGACTCCTTATCTGGAAGACCTCCTTTCCCAGCTCGAAGAAGAGGGAATCAGAGTGGTTGAAGAGGAGGCAGAAAAAGAAGAATTAGGAAAGGTCAAAGAAGGGAAACTTCCCGATTTTGTAAACCTCTATCTCAGAGAAATTTTTAAGTTTCCCATCCTTTCAAGAGAAGAGGAAAGGGAATTGGTCAAAGGAATAGAGATAAACAGGGCAAAACTAAATGAGATAGAGTTGGAATTAAACCTTCCTCTTAGAAAGATTAAACATCTTTTTATGGCTCGACGAGAAAAAGATAAAGGCAAAAAGATAGACTTTAACATTATACCGGGCATAAGTCCTGAGAAAGCCAAAGAGAATGTAGAAAAAATAATTCAGATAGAAGCCAAAAATGAAGAAAATAAAAAAATAATCATAGAAAGCAACCTCCGCCTTGTAGTAAGGGTAGCAAAACGATACCATCACGCCAGTCTTTCATTTCTTGATTTAATTGCAGAAGGGAACCTTGGGTTGATGAGGGCTATAGATAAATTTGATTACAAACAGGGGTATCGCTTTTGCACTTATGCGATCTGGTGGATAAGACACGCCATAAACAGGGCAATTGTAAATAAGGGGCAGATAATCCGTCTGCCTGTTTATATCTCCGAGATGATTGATAAATGTATGAAGGTTACCCATATCCTCTCAAATAAACTTGGAAGGGAACCAACCCTTGAAGAAATTGCAGGTGAATTAAATATGCCATTAATGGATATTGTAAGGGCAATTAATGCCTCCCGACACCCATCATCTCTTGAGGCATCGGTTGTGCCGGGAAATAAAACCAAATTTATTGATATAATTGAAGATAGAAGGAGAATGACTCCGGAAAAGAATGTATTCTGGTCATCTCTGTGTGAAAAGATAGAGTCACTTTTATCAGAAGGTTCGCTGGAGGAAAGAGAAAAGGAGATAATTAAACTAAGATACGGGCTTGCCGGGAATAACCCTCTTACATTAAAAGAAATTGGGCAGATGTATGGAATAACACGGGAAAGGGTAAGACAAATTGAGGAGAGAACCCTTTTCAAACTTCGCCACCTGCAGATAACCGAAGAGCTTAGAGATTTTCTTACAAATGATTAA
PROTEIN sequence
Length: 416
MNRESAPLKEIEGIKLLLIKGKKKGSLTYEEIGEVFDGKAVWTPYLEDLLSQLEEEGIRVVEEEAEKEELGKVKEGKLPDFVNLYLREIFKFPILSREEERELVKGIEINRAKLNEIELELNLPLRKIKHLFMARREKDKGKKIDFNIIPGISPEKAKENVEKIIQIEAKNEENKKIIIESNLRLVVRVAKRYHHASLSFLDLIAEGNLGLMRAIDKFDYKQGYRFCTYAIWWIRHAINRAIVNKGQIIRLPVYISEMIDKCMKVTHILSNKLGREPTLEEIAGELNMPLMDIVRAINASRHPSSLEASVVPGNKTKFIDIIEDRRRMTPEKNVFWSSLCEKIESLLSEGSLEEREKEIIKLRYGLAGNNPLTLKEIGQMYGITRERVRQIEERTLFKLRHLQITEELRDFLTND*