ggKbase home page

Nitrospinae bacterium RIFCSPLOWO2_02_FULL_39_110

RIFCSPLOWO2_02_FULL_RifCSPlowO2_12_Nitrospinae_39_15_curated_39_110
In projects: RIFCSPLOWO2_02_FULL  |  2500-curated-genomes  |  rifle_organic_carbon

Consensus taxonomy: RLO_Nitrospinae_39_15  →  Nitrospinae  →  Bacteria

Displaying items 1-50 of 120 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2489
Species: RLO_Nitrospinae_39_15 (93.75%)
48 49786 bp 39.34 109.55 92.01
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739
Species: RLO_Nitrospinae_39_15 (89.13%)
46 45241 bp 37.16 109.55 92.45
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_354
Species: RLO_Nitrospinae_39_15 (93.48%)
46 54142 bp 38.60 109.55 94.05
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5817
Species: RLO_Nitrospinae_39_15 (68.29%)
41 36263 bp 39.10 109.55 91.08
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_3865
Species: RLO_Nitrospinae_39_15 (100%)
40 27669 bp 38.79 109.55 90.52
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2073
Species: RLO_Nitrospinae_39_15 (92.31%)
39 45887 bp 39.42 109.55 93.73
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_911
Species: RLO_Nitrospinae_39_15 (97.44%)
39 36603 bp 38.20 109.55 91.47
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2129
Species: RLO_Nitrospinae_39_15 (91.43%)
35 33446 bp 39.67 109.55 93.58
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5202
Species: RLO_Nitrospinae_39_15 (94.12%)
34 33314 bp 39.11 109.55 92.38
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5714
Species: RLO_Nitrospinae_39_15 (93.75%)
32 25414 bp 39.38 109.55 89.64
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2230
Species: RLO_Nitrospinae_39_15 (96.88%)
32 27563 bp 39.55 109.55 91.68
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_1420
Species: RLO_Nitrospinae_39_15 (100%)
26 29723 bp 39.20 109.55 92.68
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2742
Species: RLO_Nitrospinae_39_15 (96%)
25 22667 bp 40.82 109.55 91.08
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_4515
Species: RLO_Nitrospinae_39_15 (100%)
23 17257 bp 39.13 109.55 88.68
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2654
Species: RLO_Nitrospinae_39_15 (100%)
23 22336 bp 37.66 109.55 94.61
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_12538
Species: RLO_Nitrospinae_39_15 (95.65%)
23 19987 bp 39.06 109.55 85.66
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2988
Species: RLO_Nitrospinae_39_15 (100%)
22 21924 bp 39.12 109.55 92.84
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2661
Species: RLO_Nitrospinae_39_15 (95.45%)
22 23032 bp 39.50 109.55 95.64
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2370
Species: RLO_Nitrospinae_39_15 (90.91%)
22 23590 bp 38.62 109.55 90.06
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_12284
Species: RLO_Nitrospinae_39_15 (100%)
21 15113 bp 38.23 109.55 76.92
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_3242
Species: RLO_Nitrospinae_39_15 (100%)
21 21278 bp 38.28 109.55 90.14
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_6196
Species: RLO_Nitrospinae_39_15 (100%)
21 22136 bp 38.66 109.55 95.64
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_14914
Species: RLO_Nitrospinae_39_15 (95%)
20 16910 bp 38.63 109.55 93.16
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_3257
Species: RLO_Nitrospinae_39_15 (90%)
20 20469 bp 39.02 109.55 94.93
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_16182
Species: RLO_Nitrospinae_39_15 (100%)
20 12424 bp 37.53 109.55 91.61
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_2955
Species: RLO_Nitrospinae_39_15 (100%)
19 21103 bp 40.05 109.55 91.71
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5479
Species: RLO_Nitrospinae_39_15 (100%)
19 15259 bp 38.89 109.55 90.77
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_12747
Species: RLO_Nitrospinae_39_15 (100%)
18 15243 bp 40.60 109.55 91.54
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_8061
Species: RLO_Nitrospinae_39_15 (94.44%)
18 16979 bp 39.67 109.55 92.81
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_21091
Species: RLO_Nitrospinae_39_15 (83.33%)
18 13149 bp 37.88 109.55 89.22
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5249
Species: RLO_Nitrospinae_39_15 (100%)
18 15605 bp 35.80 109.55 92.84
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_14503
Species: RLO_Nitrospinae_39_15 (100%)
18 18290 bp 38.93 109.55 93.85
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_7286
Species: RLO_Nitrospinae_39_15 (94.44%)
18 14138 bp 37.53 109.55 89.31
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_6242
Species: RLO_Nitrospinae_39_15 (100%)
18 15016 bp 39.42 109.55 92.30
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9318
Species: RLO_Nitrospinae_39_15 (100%)
17 12089 bp 39.50 109.55 87.03
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_43786
Species: RLO_Nitrospinae_39_15 (88.24%)
17 14941 bp 43.87 109.55 83.45
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_32255
Species: RLO_Nitrospinae_39_15 (88.24%)
17 14449 bp 40.51 109.55 90.11
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5710
Species: RLO_Nitrospinae_39_15 (94.12%)
17 14924 bp 39.12 109.55 90.14
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_16693
Species: RLO_Nitrospinae_39_15 (100%)
17 18485 bp 40.80 109.55 90.45
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_3714
Species: RLO_Nitrospinae_39_15 (100%)
17 18766 bp 38.96 109.55 94.80
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_20950
Species: RLO_Nitrospinae_39_15 (94.12%)
17 18356 bp 38.14 109.55 86.03
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_7691
Species: RLO_Nitrospinae_39_15 (100%)
16 13301 bp 38.97 109.55 88.46
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_10436
Species: RLO_Nitrospinae_39_15 (100%)
16 17377 bp 41.95 109.55 96.33
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5908
Species: RLO_Nitrospinae_39_15 (75%)
16 16048 bp 37.79 109.55 91.62
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_6385
Species: RLO_Nitrospinae_39_15 (93.33%)
15 14000 bp 38.83 109.55 91.91
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_4477
Species: RLO_Nitrospinae_39_15 (100%)
15 18037 bp 40.75 109.55 93.32
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5673
Species: RLO_Nitrospinae_39_15 (85.71%)
14 14994 bp 39.72 109.55 94.27
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_43437
Species: RLO_Nitrospinae_39_15 (92.86%)
14 9530 bp 38.18 109.55 85.78
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_6643
Species: RLO_Nitrospinae_39_15 (92.31%)
13 13704 bp 39.09 109.55 95.56
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_21618
Species: RLO_Nitrospinae_39_15 (100%)
13 13531 bp 39.65 109.55 95.91
Displaying items 1-50 of 120 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.