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RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_trna_1
unknown

Not on your lists

189..260
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_trna_2
unknown

Not on your lists

382..453
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

603..1595
DNA (993bp) protein (331aa)
Metal dependent phosphohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II97_KORVE id=5225869 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
metal dependent phosphohydrolase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
metal dependent phosphohydrolase
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1602..3284)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YLJ9_9BACT
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists


comp(3284..4543)
DNA (1260bp) protein (420aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Histidine--tRNA ligase n=2 Tax=Geobacter sulfurreducens RepID=SYH_GEOSL
hisS; histidyl-tRNA synthetase
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4643..7771)
DNA (3129bp) protein (1043aa)
heavy metal efflux pump, CzcA family Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Heavy metal efflux pump, CzcA family id=4384349 bin=GWF2_Ignavibacteria_35_20 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
heavy metal efflux pump, CzcA family
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7812..9254)
DNA (1443bp) protein (481aa)
Putative cation efflux system transmembrane protein (Modular protein) n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z0V1_9BACT
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RND family efflux transporter MFP subunit
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9348..10631)
DNA (1284bp) protein (428aa)
Outer membrane efflux protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YM80_9BACT
outer membrane efflux protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
outer membrane efflux protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10643..11245)
DNA (603bp) protein (201aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11242..11748)
DNA (507bp) protein (169aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Geobacter sp. (strain M21) RepID=C6E5H2_GEOSM
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11752..12282)
DNA (531bp) protein (177aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(12300..13316)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00035CBE6F
cytochrome b/b6 domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cytochrome b/b6 domain-containing protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(13313..13672)
DNA (360bp) protein (120aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(13789..14280)
DNA (492bp) protein (164aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(14281..14955)
DNA (675bp) protein (225aa)
Methyltransferase type 11 n=1 Tax=uncultured bacterium RepID=K2FTP0_9BACT
type 11 methyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
type 11 methyltransferase
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(14955..15863)
DNA (909bp) protein (303aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(15863..16681)
DNA (819bp) protein (273aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(16877..18190)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YZZ5_9BACT
ATP-binding protein; K04562 flagellar biosynthesis protein FlhG Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ATP-binding protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(18215..18880)
DNA (666bp) protein (222aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=3910368 bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(18862..19113)
DNA (252bp) protein (84aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_trna_3
unknown

Not on your lists

19234..19306
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_trna_4
unknown

Not on your lists

19403..19474
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(19555..20904)
DNA (1350bp) protein (450aa)
Mg/Co/Ni transporter; K06213 magnesium transporter Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Mg/Co/Ni transporter id=4925451 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Mg/Co/Ni transporter
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(20901..22724)
DNA (1824bp) protein (608aa)
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
acetyl-CoA carboxylase n=1 Tax=Orenia marismortui RepID=UPI00035D8FBD
pyruvate carboxylase subunit B
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(22793..23305)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ58_DESAR
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_22
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(23345..23515)
DNA (171bp) protein (57aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_23
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(23597..24271)
DNA (675bp) protein (225aa)
SAM-dependent methyltransferase n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JVJ6_9BACT
smtA; SAM-dependent methyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
smtA; SAM-dependent methyltransferase
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_24
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(24429..25502)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJN1_9PLAN
DRTGG domain protein; K06873 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
DRTGG domain protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_25
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(25499..27601)
DNA (2103bp) protein (701aa)
Acetyl coenzyme A synthase alpha subunit n=1 Tax=planctomycete KSU-1 RepID=I3IJN0_9PLAN
acetyl coenzyme A synthetase (ADP forming), alpha domain protein; K09181 hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
acetyl coenzyme A synthetase (ADP forming), alpha domain protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_5739_26
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

27796..28413
DNA (618bp) protein (206aa)
MotA/TolQ/ExbB proton channel (Modular protein) n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZC80_9BACT
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
MotA/TolQ/ExbB proton channel family protein
Displaying items 1-30 of 46 in total

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