ggKbase home page

RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_38063_2

Organism: Nitrospinae bacterium RIFCSPLOWO2_02_FULL_39_110

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38
Location: 921..1745

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 472
  • Evalue 5.70e-130
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 238.0
  • Bit_score: 212
  • Evalue 1.60e-52
Shikimate dehydrogenase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWT7_METFV similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 238.0
  • Bit_score: 212
  • Evalue 5.80e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 825
TTGAAATTATTACACTATGGAACAAAAGAAAATTGCGGTGTAAGGAAAAGTTTTTATAATCCACCGGAAAAAGTCGTTCAAAAAAGTCATTnnnnnnnnnnnnnnAAGGGGATAAATGTAACCATACCGCACAAAGAATCTGTGATACCATATTTAGATAGTTTAGATGAGGATGCCAGACTTATAGGGGCGGTTAATACTATCAAACTTGATGGAGATAAACTTAATGGGTATAATACCGATGGGAGGGGGTTTTCAGAATCACTTAAAAGAGATGCCCATGAGGAAGTAAAGGGGAGGAGTGTAGTTATACTTGGTGCAGGAGGCGCTGCGAGGGCTATTGCAATCCAGATAGCTCTGGAAGGGGCAGAGAGGATAGTCATAGCCAATAGAACTATAGAGAGAGGAGAAAAATTAGCAGGGTATATAAATGCAAAGTGCAAAATGCAAAGTGCAAAATGCAAAGTTAAAACAGTATCATTAAAGGATAATTCATTAGTTGAATATTTTAGAGAAGCGGATATAATTATCAATACTACACCTGTTGGAATGAAAGGGTATAATCAGCTATTGTTTGCTTATGATTATATATCTAACAGGCATCTGGTTTGTGACATAGTATATAGACCTCTTGAAACCAAACTTTTAAAGGAAGCAGATAAAAAGGGAGCAAGGACACTTAATGGATTGGGTATGCTTGTCTATCAGGGGAGTTTATCTTTCAAAATCTGGACAGGTTATGAAATGCCTGTTGAAGTTGTGAAAAAAACATTGATGGAGGAACTCAGTAAAGAGAAATTCAGGAAGAGAAGAACAAATACATGA
PROTEIN sequence
Length: 275
LKLLHYGTKENCGVRKSFYNPPEKVVQKSHXXXXXKGINVTIPHKESVIPYLDSLDEDARLIGAVNTIKLDGDKLNGYNTDGRGFSESLKRDAHEEVKGRSVVILGAGGAARAIAIQIALEGAERIVIANRTIERGEKLAGYINAKCKMQSAKCKVKTVSLKDNSLVEYFREADIIINTTPVGMKGYNQLLFAYDYISNRHLVCDIVYRPLETKLLKEADKKGARTLNGLGMLVYQGSLSFKIWTGYEMPVEVVKKTLMEELSKEKFRKRRTNT*