ggKbase home page

RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_6101_3

Organism: candidate division WOR-1 bacterium RIFCSPLOWO2_02_FULL_46_20

near complete RP 48 / 55 BSCG 48 / 51 ASCG 10 / 38
Location: 1895..2473

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 384
  • Evalue 6.50e-104
RNA polymerase sigma factor id=1750195 bin=GWE2_RBX1_39_32 species=Eubacterium ventriosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 198.0
  • Bit_score: 138
  • Evalue 7.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_WOR_1_46_20 → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 579
ATGATCAGTAGAAAAGAAGTTGAAGACCGCATCGTTAGGATCCTGCGCGAAGAATATCTCAAACATTCAAACGAAACCCTGGAAAAATACGAGCCGCAAATAAAATCGACCGTGCGCTGGTATGTTTCGTCGCTCCCCCGCCATATTGCCGGCTCCGAAGCCCATGATCTGGAAGCCGAAGCCAAAATGGCTTTTTTGGATTGTTTAAAGACCTGGGATCCGCGACGAGGCGAGCTCTGGTCTTATGTTTCGGTCAGGTTAAAAGGCGCCATGCAAGATTATTTACGCAAACGCGGGGGAGACCCGGTCGCCGGCATCTACGAGCACATTATTGCTTCCGCTAATGTTTATATGGCTTTTAACAAAAAATCAATTGCCCACGAAGAAATAGATAAAACCCTGCATCTTGATTCGGCCATGAAAGATTTTGAAGAAAAAGAAAAGGCGGTCATTGAAAAGTATTACAAAGAAGACAAGACTTTTAAAGAGATCGGCGCAGAAATTGGTTTATCCGAATCACAAGTCAGCCGCATCTGCAAAGACGCGACGGTAAAACTCAAAAAAGCCCTCCGCGAATAA
PROTEIN sequence
Length: 193
MISRKEVEDRIVRILREEYLKHSNETLEKYEPQIKSTVRWYVSSLPRHIAGSEAHDLEAEAKMAFLDCLKTWDPRRGELWSYVSVRLKGAMQDYLRKRGGDPVAGIYEHIIASANVYMAFNKKSIAHEEIDKTLHLDSAMKDFEEKEKAVIEKYYKEDKTFKEIGAEIGLSESQVSRICKDATVKLKKALRE*