ggKbase home page

RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1878_19

Organism: candidate division WOR-1 bacterium RIFCSPLOWO2_02_FULL_46_20

near complete RP 48 / 55 BSCG 48 / 51 ASCG 10 / 38
Location: comp(13955..14683)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3A9_THEOJ similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 242.0
  • Bit_score: 125
  • Evalue 8.30e-26
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 470
  • Evalue 1.50e-129
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 242.0
  • Bit_score: 125
  • Evalue 2.30e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_WOR_1_46_20 → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 729
ATGACCAGGGGAAAAAAACATTCCGCCCAAAGAACTGTCTTGCCAAAGTCGATTGAGGAATATCTGCCGCTGGTACATTCGATCGCGTCAATGGTTTCGGGCAAGGGTTTGCCGCCCAATATTCAATATGACGATCTGGTTTCAGACGGCACCGTTGGCTTGATGAAAGCCTGGGATAATTTTGACCCGAATCGCGGAGTAAAATTTGAGACCTACTCTTCATATAGGATACGGGGTGAGATCCTGGATGGCTTAAGAAATTATAACCCGGTACCTTACAGGGTCCAGGTGATGGTGCGTGACCTGGCTAAAAAGGGTGTTAAGTCGGTTGTTAGCAGCAAAGAAAGAAAAGAAGACGAGCTATTAGATAAAAAGGAATTGTCTGAAGCTGAATTTAAACAAGCAATTAAGCGAATTAAGAAAATTGTTTCTGCCTCGGCCCTGATGTATCTTTTATCGATTGAAGAAATGGCCGGAATGGGGATTGAGGCCCCGGTGCCAGGGGAGTCAACTCCGGCTTCAGAGCTGGAGTTCGCGGAGCTCAAGTTGAGAATTAGATCGGTCGTGCAGGAGCTGTCTCCCTTGCAGCGGAGGGTGACACAGCTCTTTTATCAGGACGGAATAAATCAGCGGGCAATTGCCGTAAAACTAAAATTGTCCCGTCCCAAGGTTTGCCGTCTATTGGCAAAAGCGATAAAAACAATTAAGGGGAAACTTAAGCATGATTGA
PROTEIN sequence
Length: 243
MTRGKKHSAQRTVLPKSIEEYLPLVHSIASMVSGKGLPPNIQYDDLVSDGTVGLMKAWDNFDPNRGVKFETYSSYRIRGEILDGLRNYNPVPYRVQVMVRDLAKKGVKSVVSSKERKEDELLDKKELSEAEFKQAIKRIKKIVSASALMYLLSIEEMAGMGIEAPVPGESTPASELEFAELKLRIRSVVQELSPLQRRVTQLFYQDGINQRAIAVKLKLSRPKVCRLLAKAIKTIKGKLKHD*