ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_375318_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1..465)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug/solvent efflux pump membrane transporter MepB n=1 Tax=Pseudomonas putida S610 RepID=V6J723_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 290
  • Evalue 9.50e-76
hydrophobe/amphiphile efflux-1 (HAE1) family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 155.0
  • Bit_score: 300
  • Evalue 1.70e-78
multidrug transporter similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 290
  • Evalue 2.70e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGTCGAAATTCTTTATCGATCGGCCGATCTTCGCCTGGGTGATTGCCCTGGTCATCATGCTGGTCGGCGCGCTGTCGCTGCTCAAGCTGCCGATCAACCAATACCCGAGCATCGCGCCGCCGGCCATCGCCATCGCCGTGAACTACCCGGGGGCGTCCGCACAGACGGTGCAGGATACGGTGGTGCAGGTGATCGAGCAGCAGCTCAACGGCATCGACAACTTGCGCTATGTCACCTCGGAAAGTAATTCCGACGGCAGCATGGCCATCACCGCCACCTTCAACCAGGGCACCAACCCGGACACCGCCCAGGTGCAGGTGCAGAACAAGCTCAACCTGGCCACCCCGCTGCTGCCGCAGGAAGTACAGCAGCAGGGCATCCGCGTGACCAAGGCGGTGAAGAACTTCCTGATGGTGATCGGCCTGGTCTCCGAAGACGGCAGCATGAGCAAGGACGACCTGGCC
PROTEIN sequence
Length: 155
MSKFFIDRPIFAWVIALVIMLVGALSLLKLPINQYPSIAPPAIAIAVNYPGASAQTVQDTVVQVIEQQLNGIDNLRYVTSESNSDGSMAITATFNQGTNPDTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGLVSEDGSMSKDDLA