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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8907_10

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110

near complete RP 41 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38
Location: 8281..9567

Top 3 Functional Annotations

Value Algorithm Source
gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 428.0
  • Bit_score: 841
  • Evalue 5.60e-241
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DB4244 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 414.0
  • Bit_score: 626
  • Evalue 1.60e-176
gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 427.0
  • Bit_score: 626
  • Evalue 7.50e-177

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Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGGCAAGCAGCGAAATCCGGCGCCGCCCGACGCGCCAGGTCCGGGTCGGCGAGATCGTCATCGGCGGCGGCGCGCCCATCGTGGTGCAGTCGATGACCAACACCGATACGGCGGATGCTGTGGCGACGGCACGGCAGGTGCACGAACTCGCGGGGGCGGGGTCGGAACTCGTGCGCATCACCGTCAACACGGCAGAGGCGGCCGCCAAGGTGGCAGAGATCCGGGAGCGGCTCGACGCACTGGGCTGTGGCGTGCCGCTGGTCGGCGACTTCCACTTCAACGGGCACAAGCTGCTGGCCGATCACCCCGGGTGTGCACAGGCGCTGGCGAAATACCGCATCAACCCCGGCAACGTGGGGCGGGGGGCAAAGCGCGACGAGCAATTCGCGGCGATGATCGAGTTCGCGTGCCGCTACGGCAAGCCGGTGCGCATCGGGGTCAACTGGGGCAGCCTCGACCAGGAATTGCTCGCGCGGCTGATGGACGAAAACGGCAGACTCCCGCAGCCGCTCGATGGGCAGGCCGTCATGCGCGAGGCGCTGATCGCCTCGGCGCTGGAATCGGCCGCGCGCGCCGAAGAACTCGGCCTTGCCGGAGACCGCATCGTCTTGTCGTGCAAGGTGAGCGGCGTGCAGGATCTGGTGGTCGTCTACCGGGCGCTTTCGCGCCGCTGCGACTATCCGCTGCACCTGGGCCTCACCGAGGCCGGTATGGGCACCAAGGGCATCGTTGCCTCGACCGCGGCGATGTCGGTGCTGCTGCAGGAGGGGATTGGCGACACCATCCGCGTCTCGCTGACGCCGGAGCCCGGCGGGGACCGGACGCGGGAGGTGGTTGTGGCGCAGGAGATCCTGCAGACCATGGGGCTGCGGGCGTTTGCGCCGATGGTGATTTCCTGCCCGGGCTGCGGGCGCACGACCAGCACCTATTTCCAGGAACTGTCGGCGAAGATCCAGTCCTATCTGCGCTCGCAGATGCCCCGATGGCGGGAACGCTACCCGGGCGTGGAATACATGCACGTCGCGGTGATGGGATGTGTGGTCAACGGGCCGGGGGAGTCGCGCCAGGCGAACATCGGCATCAGCCTGCCCGGGTCCGGCGAGCGGCCGGTCGCGCCGGTCTATGTCGACGGCGAAAAGACGGTGACGCTCAAGGGCGAGGCGATTGCCGAAGAATTCCAGAAACTCGTGGAGAATTACGTCCGCACCCGCTACGGCGAGGGCGGGGCGCTGCGCCGGGCGCCCGCAGCCAGGAATAGGACAATACCCCTGAAGTCGGCCGTTTGA
PROTEIN sequence
Length: 429
MASSEIRRRPTRQVRVGEIVIGGGAPIVVQSMTNTDTADAVATARQVHELAGAGSELVRITVNTAEAAAKVAEIRERLDALGCGVPLVGDFHFNGHKLLADHPGCAQALAKYRINPGNVGRGAKRDEQFAAMIEFACRYGKPVRIGVNWGSLDQELLARLMDENGRLPQPLDGQAVMREALIASALESAARAEELGLAGDRIVLSCKVSGVQDLVVVYRALSRRCDYPLHLGLTEAGMGTKGIVASTAAMSVLLQEGIGDTIRVSLTPEPGGDRTREVVVAQEILQTMGLRAFAPMVISCPGCGRTTSTYFQELSAKIQSYLRSQMPRWRERYPGVEYMHVAVMGCVVNGPGESRQANIGISLPGSGERPVAPVYVDGEKTVTLKGEAIAEEFQKLVENYVRTRYGEGGALRRAPAARNRTIPLKSAV*