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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8907_15

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110

near complete RP 41 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38
Location: 14348..14587

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=HFQ_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 76.0
  • Bit_score: 141
  • Evalue 2.80e-31
hfq; RNA-binding protein Hfq; K03666 host factor-I protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 158
  • Evalue 3.10e-36
hfq; host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 78.0
  • Bit_score: 141
  • Evalue 7.90e-32

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Taxonomy

R_Betaproteobacteria_61_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGAGTACCAAAGGACAGTTACTACAAGATCCGTTCCTCAACACGCTTCGCAAGGAGCACGTGCCGGTTTCGATCTATCTGGTCAACGGCATCAAGCTCCAGGGGCAGATTGAATCGTTCGACCAGTACGTCGTGCTGCTGAAGAACACCGTCACCCAGATGGTCTACAAGCACGCGATTTCCACAGTTGTTCCCGCGCGCGCGGTGAACATCGCCTTCGAGCATCCCTCCGACACCTGA
PROTEIN sequence
Length: 80
MSTKGQLLQDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLKNTVTQMVYKHAISTVVPARAVNIAFEHPSDT*