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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_20

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110

near complete RP 41 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38
Location: comp(22939..24498)

Top 3 Functional Annotations

Value Algorithm Source
putative Efflux transporter, RND family, MFP subunit; K02005 HlyD family secretion protein Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 519.0
  • Bit_score: 977
  • Evalue 1.00e-281
Efflux transporter, RND family, MFP subunit id=3746800 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 565.0
  • Bit_score: 475
  • Evalue 5.40e-131
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 523.0
  • Bit_score: 470
  • Evalue 6.40e-130

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Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGAAGAAAATTCTCTCTGCAATCATCGTGGTTGCGCTGCTGGTTGCCGGCGGCGTCTACTTCTATCTGCGCCAGCAGCAGAGCGCCGCTCCCGGCTTCCGGCTCGCCAAGATCGAACGCGGCCTGATCACCGCGGTGGTCTCCTCCACGGGCACGCTGAACGCGGTAACCACGGTTCAGGTCGGGTCACAGGTCTCGGGCCAGATCAAGGAGATATTGGCCGATTTCAACACCGAGGTAAAAAGCGGCCAGTTGATCGCGCGCATCGATCCGGAGCAGTTTGAATCGCGGGTGGCCCAGGTCAAGGCGGATTTCGAGGCGGCGCAAAGCGCGGTCGAGGTCGCGCGCAGCAACGTCCTCGCCGCAAGAGCGGACCGTGCGCGCACGCAGGCGACGCTCGCCGACGCGGCCCGCGACCTGGAACGCAAGACGTTGTTGGTGGAGAAGAACTTCATCTCCGCCTCGGAGCGGGACAAAGCCCAGACGGCATACGATGTCGCGCGTGAGCAGGTGCGCACTGCGGAGGCGCAGATCGCCGTCCAGGAGGCGCAGGTCCGCAACGCGCAATCGGTGGTCAAGCAGCGCGACGCGGCGCTCAGGCAGGCCACGATCGACCTGGATCGCACTTACATCCGCGCGCCGGTTGCCGGCACCGTCATCTCGCGCAACGTCGACGCCGGCCAGACTGTCGCCGCGAGCCTGCAGGCGCCGACGCTGTTCACCATCGCCCGGGACTTGTCGGCCATGCAGGTGGACACCTCGGTTGACGAGGCCGACGTCGGACGGCTCCGGGTCGGCCAGCCGGCGACTTTCACCGTGGACGCATTTCCGCGCCGCAATTTCAACGGCAGCATCACCCAGATCCGCAAAGCGCCGACGATAGTGCAGAACGTCGTCACCTACACGGTGGTGATCTCGGCGGACAACCCAGAGCGCGCCCTGCTGCCGGGAATGACGGCCAATGTGCGCATCGTCGTCGACCAGCGAGAAAACGCGCTCAAGGTGCCCAATGCGGCGCTGCGCTTCCGTCCCGCCGGCAGCAGCGACACCGGGCGCGACGCGCGCGCACCGGAATCTGCCGCAAAGGATCGGGGCGCGCCAGGGGGACAAGGAGGACAGGCTTTCCGGCAGCGGGTCTTCTCCGAACTCAGTCTCGACGATGCGCAGAAAGCCCGAGTCGACCAGATCCTTGCCGAGTCGCGTACCAAGATGGGCGCACTCGCACAGATGCAGAACGAATCCGAACGCCGCAAGCATGCCGAGCGCATCCGCGCTGAGTCGCGGGCGCAGATCGCCTCCGCGCTCAAGCCGGAGCAGCACTCCGGGTTCGAGCGCATCGTCGCAGAACTCTTCGGAGGCCGCCCCAGCACCGGTCGGGTCTGGATTCTGGATGCCGACGGCAGGCCCAAGGCGGTGGAGGTCAGGCTCGGTCTGTCCGACGGCGGTTCGACGGAAGTCGCTTCCGCCGACCTCGCGGAAGGCCGGGAGGTCATTGTCGGCTTCGCGGAGACGGGCAAGGCCGCGCGGGTGCAGGGCGGCCCCCCGCGACTGCGATTCTGA
PROTEIN sequence
Length: 520
MKKILSAIIVVALLVAGGVYFYLRQQQSAAPGFRLAKIERGLITAVVSSTGTLNAVTTVQVGSQVSGQIKEILADFNTEVKSGQLIARIDPEQFESRVAQVKADFEAAQSAVEVARSNVLAARADRARTQATLADAARDLERKTLLVEKNFISASERDKAQTAYDVAREQVRTAEAQIAVQEAQVRNAQSVVKQRDAALRQATIDLDRTYIRAPVAGTVISRNVDAGQTVAASLQAPTLFTIARDLSAMQVDTSVDEADVGRLRVGQPATFTVDAFPRRNFNGSITQIRKAPTIVQNVVTYTVVISADNPERALLPGMTANVRIVVDQRENALKVPNAALRFRPAGSSDTGRDARAPESAAKDRGAPGGQGGQAFRQRVFSELSLDDAQKARVDQILAESRTKMGALAQMQNESERRKHAERIRAESRAQIASALKPEQHSGFERIVAELFGGRPSTGRVWILDADGRPKAVEVRLGLSDGGSTEVASADLAEGREVIVGFAETGKAARVQGGPPRLRF*