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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_4870_22

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(20322..20777)

Top 3 Functional Annotations

Value Algorithm Source
lmrA; regulatory protein TetR Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 151.0
  • Bit_score: 303
  • Evalue 1.90e-79
Regulatory protein, TetR id=3964598 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 147.0
  • Bit_score: 168
  • Evalue 7.00e-39
lmrA; regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 147.0
  • Bit_score: 135
  • Evalue 1.40e-29

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGAAGCCGGGCTCGCTCTACTACCACTTCCCGTCCAAGGAAGAGTTGTTGATCGCTGTCTATCAGGCGGGCGTGCTGGCGCTGGAGGAGGCGACCGCCGAAGCCGTGGCCAAGGACACGGATCCGTGGACACGCCTGGAGACGCTGTGCAAGGCCCATCTGGAAGCGGTTCTGCGTGACAGCGACTACGCCCAGGTCCTGATCCGCGTGCTGCCTGACGACATTCCCCAGGCCGCAGACCGTCTGCGGGAACTGCGCGAAAGCTACGAGCAAGTGTTTCGCAAAGTCGTGGCGCAACTGCCGCTCCCCGCGGGTACGGACCGACGTGCCCTTCGTCTGATGTTGATTGGCGCGCTCAACTGGGCGACGCTGTGGTTCAACCCCGATGGACGCGATTCCCCACGCGTTCTCGCGCGAAAGTTTGTGGGGCTAGTGAAGGAAATGCAAGATGGCTGA
PROTEIN sequence
Length: 152
MKPGSLYYHFPSKEELLIAVYQAGVLALEEATAEAVAKDTDPWTRLETLCKAHLEAVLRDSDYAQVLIRVLPDDIPQAADRLRELRESYEQVFRKVVAQLPLPAGTDRRALRLMLIGALNWATLWFNPDGRDSPRVLARKFVGLVKEMQDG*