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RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(3..506)
-----------------
DNA (504bp)
protein (168aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4) Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
alpha-methylacyl-CoA racemase (EC:5.1.99.4) id=24404322 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
alpha-methylacyl-CoA racemase (EC:5.1.99.4)
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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630..1019
-----------------
DNA (390bp)
protein (130aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Two component transcriptional regulator, winged helix family id=2458812 bin=GWA2_Elusimicrobia_69_24 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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1016..2524
-----------------
DNA (1509bp)
protein (503aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=2458814 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_4
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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2514..3746
-----------------
DNA (1233bp)
protein (411aa)
putative ipoprotein releasing system; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative lipoprotein releasing system id=2458819 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative ipoprotein releasing system
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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3739..4446
-----------------
DNA (708bp)
protein (236aa)
lolD; lipoprotein-releasing system ATP-binding protein LolD Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Lipoprotein ABC transporter, ATP-binding protein id=4937729 bin=GWA2_Elusimicrobia_66_18 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
lolD; lipoprotein-releasing system ATP-binding protein LolD
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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4443..5336
-----------------
DNA (894bp)
protein (298aa)
IlvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
IlvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase id=4937730 bin=GWA2_Elusimicrobia_66_18 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_7
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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5333..5821
-----------------
DNA (489bp)
protein (163aa)
UvrB/UvrC protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
UvrB/UvrC protein id=2215700 bin=GWB2_Elusimicrobium_63_22 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
UvrB/UvrC protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_8
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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5833..6885
-----------------
DNA (1053bp)
protein (351aa)
ATP:guanido phosphotransferase; K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative ATP:guanido phosphotransferase kuste3072 id=2459008 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ATP:guanido phosphotransferase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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6956..7471
-----------------
DNA (516bp)
protein (172aa)
nucleoside diphosphate kinase ; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Nucleoside diphosphate kinase id=2845727 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
nucleoside diphosphate kinase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_10
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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7468..9093
-----------------
DNA (1626bp)
protein (542aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLG2_DESK7
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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9083..9961
-----------------
DNA (879bp)
protein (293aa)
putative secreted hydrolase; K06889 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative lysophospholipase id=2215710 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
putative secreted hydrolase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_12
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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9970..10866
-----------------
DNA (897bp)
protein (299aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
N-acetylmuramic acid 6-phosphate etherase id=3431007 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
murQ; N-acetylmuramic acid 6-phosphate etherase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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10863..12002
-----------------
DNA (1140bp)
protein (380aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative chaperone id=1886820 bin=GWB2_Elusimicrobia_63_16 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
anmK; anhydro-N-acetylmuramic acid kinase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(11859..12179)
-----------------
DNA (321bp)
protein (107aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_15
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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12335..12649
-----------------
DNA (315bp)
protein (105aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_16
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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13752..13970
-----------------
DNA (219bp)
protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_17
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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14117..14800
-----------------
DNA (684bp)
protein (228aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_18
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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14849..15184
-----------------
DNA (336bp)
protein (112aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_19
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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15187..15465
-----------------
DNA (279bp)
protein (93aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_20
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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15473..15997
-----------------
DNA (525bp)
protein (175aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_18935_21
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(15894..16211)
-----------------
DNA (318bp)
protein (106aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Displaying 21 items

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