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RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_2

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76

partial RP 38 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38 MC: 1
Location: comp(383..628)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KW64_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 80.0
  • Bit_score: 141
  • Evalue 2.90e-31
RNA chaperone Hfq Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 161
  • Evalue 6.40e-37
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 75.0
  • Bit_score: 131
  • Evalue 8.40e-29

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Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGAGTAAGGGGCATACATTACAGGATCCATTCCTGAATGCTTTACGTAAGGAAAGGGTTCCTGTCTCCATATATCTTGTAAACGGTATAAAATTGCAGGGGCAGGTCGAGTCGTTTGATCAGTTTGTGGTGTTATTAAAAAACTCAGTGAGCCAGCTTGTGTACAAACATGCTATATCAACTATCGTCCCGGTGCGTAATGTCAAAATGCCCAAGGTTGAGGATGACAGCGGAACAGATGCCTAG
PROTEIN sequence
Length: 82
MSKGHTLQDPFLNALRKERVPVSIYLVNGIKLQGQVESFDQFVVLLKNSVSQLVYKHAISTIVPVRNVKMPKVEDDSGTDA*