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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2..547)
-----------------
DNA (546bp)
protein (182aa)
Alcohol dehydrogenase zinc-binding domain protein id=4350135 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
theronine dehydrogenase-like Zn-dependent dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
theronine dehydrogenase-like Zn-dependent dehydrogenase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(544..1554)
-----------------
DNA (1011bp)
protein (337aa)
alcohol dehydrogenase (EC:1.1.1.1) Tax=GWC2_Rokubacteria_70_16_curated
alcohol dehydrogenase (EC:1.1.1.1)
Putative alcohol dehydrogenase id=4350134 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2871..3884)
-----------------
DNA (1014bp)
protein (338aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=GWC2_Rokubacteria_70_16_curated
Hopanoid-associated sugar epimerase id=4350132 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hpnA; NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3896..4603)
-----------------
DNA (708bp)
protein (236aa)
Hopanoid-associated phosphorylase id=4350131 bin=GWC2_Methylomirabilis_70_16 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nucleoside phosphorylase Tax=GWC2_Rokubacteria_70_16_curated
nucleoside phosphorylase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4608..4940)
-----------------
DNA (333bp)
protein (111aa)
Putative uncharacterized protein id=4350130 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4942..5958)
-----------------
DNA (1017bp)
protein (339aa)
Fe-S protein, radical SAM family id=4350129 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
radical SAM family Fe-S protein Tax=GWC2_Rokubacteria_70_16_curated
radical SAM protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6166..6966)
-----------------
DNA (801bp)
protein (267aa)
Putative uncharacterized protein id=4350128 bin=GWC2_Methylomirabilis_70_16 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein; K08977 putative membrane protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7109..9064
-----------------
DNA (1956bp)
protein (652aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=GWC2_Rokubacteria_70_16_curated
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase id=4350127 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9061..9867
-----------------
DNA (807bp)
protein (269aa)
Toluene transporter subunit: membrane component of ABC superfamily id=4350126 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
yrbE; toluene ABC transporter subunit membrane protein Tax=GWC2_Rokubacteria_70_16_curated
yrbE; toluene ABC transporter subunit membrane protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9864..10610
-----------------
DNA (747bp)
protein (249aa)
Putative ABC transporter (ATP-binding protein) id=4350125 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10651..11091
-----------------
DNA (441bp)
protein (147aa)
Mce-related protein id=4350124 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Mce-related protein Tax=GWC2_Rokubacteria_70_16_curated
Mce-related protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11118..12572
-----------------
DNA (1455bp)
protein (485aa)
Outer membrane efflux protein, putative id=4350123 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
outer membrane efflux protein Tax=GWC2_Rokubacteria_70_16_curated
outer membrane efflux protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12569..13219
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein id=4350121 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13299..13478
-----------------
DNA (180bp)
protein (60aa)
id=4350119 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4350119 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13475..14215
-----------------
DNA (741bp)
protein (247aa)
Putative Sugar nucleotidyltransferase id=4350117 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative sugar nucleotidyltransferase Tax=GWC2_Rokubacteria_70_16_curated
putative sugar nucleotidyltransferase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14217..15407
-----------------
DNA (1191bp)
protein (397aa)
Putative sugar nucleotidyltransferase and phosphatidyltransferase (Bifunctional enzyme) id=4350115 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase Tax=GWC2_Rokubacteria_70_16_curated
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15433..16491
-----------------
DNA (1059bp)
protein (353aa)
Uncharacterized protein id=4350050 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16572..17645
-----------------
DNA (1074bp)
protein (358aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=GWC2_Rokubacteria_70_16_curated
Myo-inositol-1-phosphate synthase id=4350048 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
myo-inositol-1-phosphate synthase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_28112_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17742..20492
-----------------
DNA (2751bp)
protein (917aa)
Uncharacterized protein id=4350046 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Protein export membrane protein, SecD/SecF family Tax=GWC2_Rokubacteria_70_16_curated
Protein export membrane protein, SecD/SecF family
Displaying 19 items

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