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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(2..370)
DNA (369bp) protein (123aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_69_14_curated
hypothetical protein id=24524026 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Glaciibacter superstes genus=Glaciibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_2
unknown

Not on your lists

555..680
DNA (126bp) protein (42aa)
id=4066343 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4066343 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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970..1896
DNA (927bp) protein (309aa)
cysteine synthase (EC:2.5.1.47) id=12556071 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cysteine synthase-like protein; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cysteine synthase (EC:2.5.1.47)
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(2110..3957)
DNA (1848bp) protein (616aa)
ferredoxin--nitrite reductase (EC:1.7.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Ferredoxin--nitrite reductase id=4066346 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ferredoxin--nitrite reductase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3968..4741)
DNA (774bp) protein (258aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABC82923.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABC82923.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
Uroporphyrin-III C-methyltransferase id=4066348 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(4738..5334)
DNA (597bp) protein (199aa)
uroporphyrin-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] Tax=RIFCSPLOWO2_02_FULL
Uroporphyrin-III C-methyltransferase id=4066350 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uroporphyrin-III C-methyltransferase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_7
unknown

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comp(5462..5668)
DNA (207bp) protein (69aa)
id=4066354 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4066354 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5668..5916)
DNA (249bp) protein (83aa)
Conserved protein id=4066355 bin=GWC2_Methylomirabilis_70_24 species=Sulfolobus acidocaldarius genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
response regulator SirA
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23895_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6010..6135)
DNA (126bp) protein (42aa)
Putative Nitrogen assimilation transcription regulatory protein (NtrC)(Synonyms:glnT, glnG) id=4609026 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG) Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

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