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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_11

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19

partial RP 36 / 55 MC: 2 BSCG 37 / 51 MC: 1 ASCG 10 / 38
Location: comp(6838..7416)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2513757 bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 193.0
  • Bit_score: 332
  • Evalue 2.70e-88
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 192.0
  • Bit_score: 332
  • Evalue 5.00e-88
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 188.0
  • Bit_score: 130
  • Evalue 4.40e-28

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGAGCTGTCCGACGAAGCGCTCTGCCGCCGCGTCGCTGTCCAAGAGCCGGGGGCCTTCGATCTCCTCGTGGAGCGGTACCAGGAGCGCGCCTACCGGATCGCATGGTCCATGCTGCGGGACCCGGAGGACGCCAAGGACTGCTCCCAGGAGGCCTTCATCAGGCTGCACGAGTCGGCCCGCACCTTCGCCGGCCAGGCCAAGTTCTCCACGTGGTTCTACCGCATCCTCGTCAACTGCTGCCTGGACCACCGACGGCGCAGCCGGGGCTGGCGCCGCCTCCTGTCCTGGCGCGATCCTGCCACGGGCGACACGGCGGACCGCGATCCCGTGGCGCTCCTGCCGGCGCCCTTCACCGATCCCGGAGATGCCGTGGACGAGGACCGCCGCATGAGCCGGCTCTGGAAGGCCGTGGAGAGGCTGTCGCCGCAGCAGCGCGCGGCCGTCCTGCTCTCGTGCCGGGAGGGGCTGTCCACCAAGGAGATCGCCGAGGTGCTGAGCCTGTCGGAGGCCACGGTGCGCGTGCACCTGCACCGCGCCTTCACGACGCTGAGGCGGCGCATCGGGAGCGAGCCGTGA
PROTEIN sequence
Length: 193
VELSDEALCRRVAVQEPGAFDLLVERYQERAYRIAWSMLRDPEDAKDCSQEAFIRLHESARTFAGQAKFSTWFYRILVNCCLDHRRRSRGWRRLLSWRDPATGDTADRDPVALLPAPFTDPGDAVDEDRRMSRLWKAVERLSPQQRAAVLLSCREGLSTKEIAEVLSLSEATVRVHLHRAFTTLRRRIGSEP*