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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_18

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 18746..20707

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator, Fis family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQX7_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 653.0
  • Bit_score: 1284
  • Evalue 0.0
sigma-54 dependent transcriptional regulator, Fis family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 653.0
  • Bit_score: 1285
  • Evalue 0.0
sigma-54 dependent transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 653.0
  • Bit_score: 1284
  • Evalue 0.0
  • rbh

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
ATGACCCAGGCGTTCAGTGTGCAAGACCTCGAATACCTCACGAACCTGGGGCCTGCCGCGCTGAACGATGGGCCCATCGCCGCGTTGGAACAGGCGTGGCGAGAGTGCCTGGCTGGCAAAGTCGTGCGTCCGGACGGGGTGCGCCAGGTCATCTGGGATTCCTGGCGACGCAGTGTCGAGGCGGGTATCGAGCCCGGTAACAGCGACTACCGCTTTGTTGCGCCTCATGCGCTGGCGGCGACCCTGGCCCACCATCGCGCCCTGATCGCCGCTGCCGCGCAAGTCATGCATGGATTGCTGGCTTACAACCCGCGCGGGCATATCAACCTCACGGATGCCGAGGGCACGACTCTGTATTTTTGCGGGGTGGACATCACCCCGGTGGGCAGTCGCTTGCTCGAATCGGTGCAAGGCACCAACTGCACCGGCCTGGCCCTGGCCGAAGATCGCCTGGTGTATGTGCTGGCTGAAGAAAATTTCGCCAGCGGCCTGCGCCAGCGCCACATGCACTGCGCCGCCGCGCCGATCAAGGATGCCCAAGGCCAGACCCTGGCCATGCTCACCCTGACCGCCGAGCCCGGCTGGTTTCATTTCCATACCCTGGGCACCGTTCAAGCGGCGGCCGAGGCGGTGTCGCGGCAGATGGCGCTGCAGGTGTTGCTGGAAGAACAACAGGCCGTACTCGAAGTGCTCAACGAAGGCTTGGTGGTGCTCGATCAGCGTGGCTGCATCAAGGCGCTCAACCGTTATGCGCGGCAACTGTTCGGGGTGGGGCGCGAGTTGATCGGCAGTCCTTTCCAACGCCTGGGCCGCAGTGAACTGAGCGACGCGCTGGGTGAGCCGGTGCGCGACCGCGATTGCACCTTCCACTTGCACGACGCCAGCCAACTCGCCTGCCTGGTTTCGGTATGCCCACTGGAGCAGGGTGGGGTGATTGTGTCGGTGCGCGAAAACCGCCGTATCCGCGAGATTACCCGGCGCATTATCGGCACCCAGGCCCGCTATACCTTCGAGACCATCCTGGGCACCTCGCGGGCCATACAAGATGCACTGCACCTGGGGCGCATTGCCAGTCGCAGCGAGTCCACCACCTTGATCCTCGGCGAAAGCGGCACCGGCAAGGAGCTGTTTGCCCAGGCCATTCACAACGGCAGCGAGCGTTGCAACGGCCCGTTTGTGGCGGTCAACTGCGGCGCGATCCCACGGGACCTGGTGCAGAGTGAACTGTTTGGCCACGTCGAAGGCGCGTTCACCGGCTCGGCGCGGGGTGGGGCGGCAGGCAAGTTCGAACTGGCGGATGGCGGCACCATTTTCCTGGATGAAATCGGCGACATGTCCTTCGACGCCCAGGTCAGTCTGCTACGGGTTTTGCAGGAGGGTGAGATCACCCGCGTCGGGGCCAAGCAATCGCGGCAAGTCGACGTGCGCATCATCGCCGCCACCCATCGCAACCTGAGCCAGGCGGTGGCCGAGGGCGCGTTTCGTGAAGACCTTTACTACCGACTCAACGTGCTGAACCTGAGCGTGCCGCCACTGCGTATGCGCCGTGACGATATTCCATTGCTGGCGCGGCACTTCCTGCAGCGCTGTGCCCGCTCGCTACGTAAAACGGTGCAAGGTTTCGCGCCGGATGCGTTAGCGTTGCTGTCAGCCCATGGTTGGCCGGGCAACGTGCGGGAACTGGAGAACGTTATCGAACGAGCGACCAACCTGGCGATGGGCGAGCTGATTCAATCGGCCGACTTGCCGTTGGAAACCCAGCAACGCCCGACGTTGCGCGCCTACCAGCCCCAGCCCGCGCAGGATTTGAGCAGCCATGAAAGGCACGCCATCGTTGCCGCGCTCACCAGCACCCGCGGCAACATTCGCCTGGCCGCACAGCAACTGGATGTGTCGCGGGGCGGGCTGTACAACAAGATGAGCCGGTTTGGCTTGAGCGCCGCTGATTTCCGTGAGCGCTGA
PROTEIN sequence
Length: 654
MTQAFSVQDLEYLTNLGPAALNDGPIAALEQAWRECLAGKVVRPDGVRQVIWDSWRRSVEAGIEPGNSDYRFVAPHALAATLAHHRALIAAAAQVMHGLLAYNPRGHINLTDAEGTTLYFCGVDITPVGSRLLESVQGTNCTGLALAEDRLVYVLAEENFASGLRQRHMHCAAAPIKDAQGQTLAMLTLTAEPGWFHFHTLGTVQAAAEAVSRQMALQVLLEEQQAVLEVLNEGLVVLDQRGCIKALNRYARQLFGVGRELIGSPFQRLGRSELSDALGEPVRDRDCTFHLHDASQLACLVSVCPLEQGGVIVSVRENRRIREITRRIIGTQARYTFETILGTSRAIQDALHLGRIASRSESTTLILGESGTGKELFAQAIHNGSERCNGPFVAVNCGAIPRDLVQSELFGHVEGAFTGSARGGAAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEITRVGAKQSRQVDVRIIAATHRNLSQAVAEGAFREDLYYRLNVLNLSVPPLRMRRDDIPLLARHFLQRCARSLRKTVQGFAPDALALLSAHGWPGNVRELENVIERATNLAMGELIQSADLPLETQQRPTLRAYQPQPAQDLSSHERHAIVAALTSTRGNIRLAAQQLDVSRGGLYNKMSRFGLSAADFRER*