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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 2..898

Top 3 Functional Annotations

Value Algorithm Source
trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 614
  • Evalue 1.60e-173
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadal similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 614
  • Evalue 7.80e-173
tRNA-specific 2-thiouridylase MnmA n=3 Tax=Pseudomonas RepID=I2BK72_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 614
  • Evalue 5.50e-173

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ACCGCCAACTTCGCCGCCGAGTACTGGGACAACGTGTTCGAGCACTTCCTGGCCGAATACAAGGCCGGCCGCACGCCGAACCCGGACATCCTGTGTAACCGCGAAATCAAGTTCAAGGCCTTCCTCGACTACGCCATGATGCTCGGCGCCGACCTGATAGCTACCGGCCACTACGTGCGCCGTCGCGATATCGATGGCCGCACCGAATTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCGTCGGTGGTGAGCAGATCGCCAAGACCCTGTTTCCGGTCGGCGAGCTGGAAAAGCCCGAAGTGCGCAAAATTGCCGAGAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGTATCTGCTTTATCGGCGAGCGGCGCTTCAGTGATTTCCTCAAGCAATACCTGCCGGCGCAACCGGGCGAGATCAAGACCACCGAGGGTGAAGTGATCGGCCGCCACCACGGCCTGATGTACCACACCATCGGCCAGCGCCAGGGCCTGGGTATTGGCGGTTTGAAGGACGCCGGTGAAGAGCCGTGGTACGTGCTGGTCAAAGACCTGGAAAACAACGTGCTGGTGGTCGGCCAAGGCAACGAGCACCCGCTGCTGTTCTCCGGCGCCCTGCTCGCTTCCGAGATCTATTGGGTCAACCCTATCGACTTGAGCACCCCGCGCCGCCTGACCGCCAAAGTGCGTTATCGCCAGAGCGACCAGCCCTGCACCCTGGAAAAGACCGCCACCGGCTACCGTGCCACCTTCGATGACCCGCAGCGCGCGGTCACCCCTGGCCAGTCCGTGGTGTTCTATGACGGCGAAATCTGCCTGGGCGGCGGCGTGATTGAAGTCGCGCAAGCCTGGAGCAACCCGGCATGA
PROTEIN sequence
Length: 299
TANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLDYAMMLGADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIAKTLFPVGELEKPEVRKIAEKHGLATAKKKDSTGICFIGERRFSDFLKQYLPAQPGEIKTTEGEVIGRHHGLMYHTIGQRQGLGIGGLKDAGEEPWYVLVKDLENNVLVVGQGNEHPLLFSGALLASEIYWVNPIDLSTPRRLTAKVRYRQSDQPCTLEKTATGYRATFDDPQRAVTPGQSVVFYDGEICLGGGVIEVAQAWSNPA*