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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1379_14

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(13862..15319)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor lipoprotein EmhC n=4 Tax=Pseudomonas RepID=I2BKG3_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 485.0
  • Bit_score: 932
  • Evalue 2.00e-268
emhC; efflux transporter, outer membrane factor lipoprotein EmhC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 485.0
  • Bit_score: 932
  • Evalue 5.50e-269
Efflux transporter, outer membrane factor lipoprotein EmhC {ECO:0000313|EMBL:EIK63619.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 485.0
  • Bit_score: 932
  • Evalue 2.70e-268

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAGCAAGTCGCTACTTTCCCTAGCCGTCACCGCATTCGTGCTCAGTGGCTGCTCGCTGATACCTGACTATCAGCGCCCCGAAGCGCCGGTGGCCGCGCAGTTCCCGCAGGGGCCGGCGTATTCGTCGGCCCAGGCGCCGAGCCAGGCCGCTGCCGAGCAAGGCTGGAAGCAGTTTTTCCATGACCCTGCCCTGCAACAGCTGATCCAGACCGCGTTGGTGAACAACCGTGACCTGCGTGTCGCGGCGCTGAACATCGACGCCTATGCGGCGCAATATCAGATCCAACGTGCCGACCTATTCCCGGCCGTGTCGGCCACCGGTAACGGCAGCCGTTCGCGCACCCCGGCCAAGCTGTCGCAGACCGGCGAATCGACCATCGCCAGCCAGTACTCGGCGGGCCTTGGGATCAGCTCTTATGAGCTGGACCTGTTCGGTCGCGTGCGCAGCCTCAGTGAAGAAGCGCTGCAGAAGTACTTCGCCACTGAAGAAGCACGTCGCAGCACCCAAATCAGCCTGGTGGCCAGCGTGGCGAATGCCTACCTGACCTGGCAGGCCGACAAGGAGCTGCTCAAGCTGACCCAGGACACCCTGGCCGCGTTCGAGCAAAGCTACAAGCTCACCTCGCGCAGCAATGAAGTCGGCGTGGCCTCGGCCCTCGACCTCAGCCAGGCACGCACCTCGGTGGAAAACGCCCGTGTGCAACTGGCGCGTTACACCCGCCAGGTGGCCCAGGACGAAAACAGCCTGACCCTGCTGCTGGGCACCGGCCTGCCGGCGAATATCGCCAGCAAGCCGCTGTCCGATGACCTGCTCAGCGAAGTGCCGGCCGGGTTGCCATCGGACCTGCTGCAACGTCGTCCCGATATTGTGCAAGCCGAGTACAACCTCAAGGCCGCCAACGCCAACATCGGCGCGGCCCGTGCGGCGTTCTTCCCGAGCATCAGCCTGACCGCCAGCGCCGGTACTGCCAGCCCTACCCTGGGTGGCCTGTTCAAAGGCGGTTCGGGAACCTGGGCGTTTGCCCCGCAGATCAACATCCCGATCTTCAACGCTGGTAGCCTGCGCGCAAGCCTGGACTACTCGAAGATCCAAAAAGAGATCAACGTGGCCAACTACGAGAAGGCCATCCAGACCGGCTTCCAGGAAGTCTCCGACGGCCTGGCCGCGCGTGCGACCTACAAGCAGCAACTGGATGCCCAGCGCGGCTTCGTCGAGGCTAACCAGGATTACTACCGCCTGGCCGAGCGTCGCTACCGCATTGGTGTCGACAGCAACCTGACCTTCCTCGACGCCCAGCGCCAACTGTTCAGTGCCCAGCAATCGCTGATCACCGACCGCCTGGCGCAGCTCACCAGCGAGGTCAACCTGTACAAGGCCCTCGGCGGTGGCTGGAACGAGCAGACTGCGAAGAACGAGCCGTTGAAAGAACAAGCACCGCCGTTGAAGTTGTTCTGA
PROTEIN sequence
Length: 486
MSKSLLSLAVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFFHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGNGSRSRTPAKLSQTGESTIASQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAYLTWQADKELLKLTQDTLAAFEQSYKLTSRSNEVGVASALDLSQARTSVENARVQLARYTRQVAQDENSLTLLLGTGLPANIASKPLSDDLLSEVPAGLPSDLLQRRPDIVQAEYNLKAANANIGAARAAFFPSISLTASAGTASPTLGGLFKGGSGTWAFAPQINIPIFNAGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARATYKQQLDAQRGFVEANQDYYRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTAKNEPLKEQAPPLKLF*