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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_11

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(9978..10592)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein, UPF0126 family n=3 Tax=Pseudomonas RepID=I2BWM5_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 407
  • Evalue 9.20e-111
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 407
  • Evalue 2.60e-111
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 407
  • Evalue 1.30e-110

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGTTGCTGATGCTCTACCTCGTCGCCATCACCGCCGAAGCCATGACTGGCGCCCTGTCCGCGGGGCGGCGTGGCATGGACTGGTTTGGCGTGGTGCTGATCGCTTGCGTGACAGCCCTGGGCGGCGGTTCGGTGCGCGATGTGTTGCTCGGCCACTACCCGCTGACCTGGGTCAAACACCCGGAGTACCTGGTGCTGACCTCCGTTGCAGCATTGGTGACGATCTTTATCGCGCCCTTGATGCGCCACCTGCGCTCGCTGTTCCTGGCGCTGGATGCGGTGGGGTTGGTGGCCTTCACCCTGATCGGCTGCATGACCGCCCTGGAAATGGGTCACGGTATGTTGGTGGCGTCGGTCAGCGGGGTCATCACCGGGGTATTCGGCGGCATCCTGCGGGATATCTTCTGTAACGACATCCCGCTGATCTTCCGCCGCGAGCTGTATGCCAGCGTGTCGTTCCTGGCTGCCTGGTTCTACTTGCTGTGCCTGTACCTGGAGCTGCCCAGCGAGCAAGCGATTCTGCTGACGCTGTTCAGTGGCTTCCTGTTACGCCTGCTGGCGATCCGGTTTCACTGGGAAATGCCCAAGTTCGTCTACAACGACGATGTGCACTAG
PROTEIN sequence
Length: 205
MLLMLYLVAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKHPEYLVLTSVAALVTIFIAPLMRHLRSLFLALDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRDIFCNDIPLIFRRELYASVSFLAAWFYLLCLYLELPSEQAILLTLFSGFLLRLLAIRFHWEMPKFVYNDDVH*