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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_1
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..345)
DNA (345bp) protein (115aa)
Protein HflC n=5 Tax=Pseudomonas RepID=I2BZN6_PSEFL
HflC protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(345..1520)
DNA (1176bp) protein (392aa)
HflK protein n=3 Tax=Pseudomonas RepID=I2BY43_PSEFL
hflK; HflK protein rbh
HflK protein {ECO:0000313|EMBL:EIK63321.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS10
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1617..2918)
DNA (1302bp) protein (434aa)
GTPase HflX n=5 Tax=Pseudomonas RepID=I2BW23_PSEFL
hflX; GTP-binding protein HflX Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hflX; GTP-binding protein HflX rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_4
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..3191)
DNA (261bp) protein (87aa)
RNA-binding protein Hfq n=5 Tax=Pseudomonas RepID=I2BUV8_PSEFL
RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseud
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3286..4257)
DNA (972bp) protein (324aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) rbh
tRNA dimethylallyltransferase n=3 Tax=Pseudomonas RepID=I2BY19_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4257..6173)
DNA (1917bp) protein (639aa)
DNA mismatch repair protein MutL n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K2C4_PSEFL
mutL; DNA mismatch repair protein MutL Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
mutL; DNA mismatch repair protein MutL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6173..7534)
DNA (1362bp) protein (454aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
N-acetylmuramoyl-L-alanine amidase n=4 Tax=Pseudomonas RepID=I2BS38_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7535..8005)
DNA (471bp) protein (157aa)
ATPase, YjeE family n=3 Tax=Pseudomonas RepID=I2BLK8_PSEFL
YjeE family ATPase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
YjeE family ATPase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7993..8853)
DNA (861bp) protein (287aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J584_9PSED
YjeF family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
YjeF family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8917..9981
DNA (1065bp) protein (355aa)
Epoxyqueuosine reductase n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KA21_PSEFL
iron-sulfur cluster-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
iron-sulfur cluster-binding protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9978..10592)
DNA (615bp) protein (205aa)
Membrane protein, UPF0126 family n=3 Tax=Pseudomonas RepID=I2BWM5_PSEFL
hypothetical protein
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_12
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10778..11320)
DNA (543bp) protein (181aa)
orn; oligoribonuclease (EC:3.1.-.-) rbh
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1284393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadac
Oligoribonuclease n=5 Tax=Pseudomonas RepID=C3KDV5_PSEFS
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11429..12460
DNA (1032bp) protein (344aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudom
Putative ribosome biogenesis GTPase RsgA n=4 Tax=Pseudomonas RepID=I2BVJ9_PSEFL
rsgA; ribosome small subunit-dependent GTPase A rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12747..13142
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BW44_PSEFL
hypothetical protein
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13201..14220)
DNA (1020bp) protein (340aa)
Chemotaxis protein MotB n=3 Tax=Pseudomonas RepID=I2BWQ4_PSEFL
motB; chemotaxis protein MotB Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
motB; chemotaxis protein MotB
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14224..15075)
DNA (852bp) protein (284aa)
Chemotaxis protein MotA n=2 Tax=Pseudomonas RepID=I4K7N6_PSEFL
motA; chemotaxis protein MotA Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
motA; chemotaxis protein MotA
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15242..16777
DNA (1536bp) protein (512aa)
HDOD domain protein n=2 Tax=Pseudomonas RepID=I2BY88_PSEFL
HDOD domain protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
HDOD domain protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16835..17650
DNA (816bp) protein (272aa)
rhdA; thiosulfate sulfurtransferase (EC:2.8.1.1) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
rhdA; thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JD12_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17666..18526
DNA (861bp) protein (287aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) rbh
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Pseudomonas sp. CF150 RepID=S6J590_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18661..19875)
DNA (1215bp) protein (405aa)
serB; phosphoserine phosphatase (EC:3.1.3.3) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
serB; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase n=4 Tax=Pseudomonas RepID=I2BTS7_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20009..21541
DNA (1533bp) protein (511aa)
HAMP domain protein n=2 Tax=Pseudomonas RepID=I2BRL2_PSEFL
HAMP domain protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
HAMP domain protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21761..22471)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BRP7_PSEFL
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFJ56930.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22648..24912)
DNA (2265bp) protein (755aa)
parC; DNA topoisomerase IV subunit A (EC:5.99.1.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
parC; DNA topoisomerase IV subunit A (EC:5.99.1.-) rbh
DNA topoisomerase 4 subunit A n=1 Tax=Pseudomonas sp. CF150 RepID=S6JD16_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24983..25978)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J596_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25978..27882)
DNA (1905bp) protein (635aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1037911 species="Ba
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-)
DNA topoisomerase 4 subunit B n=4 Tax=Pseudomonas RepID=I2BN47_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27929..28537)
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BQS4_PSEFL
hypothetical protein
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28716..29528)
DNA (813bp) protein (271aa)
icc; cyclic AMP phosphodiesterase (EC:3.1.4.17) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
icc; cyclic AMP phosphodiesterase (EC:3.1.4.17) rbh
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Pseudomonas sp. CF150 RepID=S6KIR0_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29626..30075)
DNA (450bp) protein (150aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BKL2_PSEFL
hypothetical protein
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30066..30683)
DNA (618bp) protein (206aa)
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
NudF protein {ECO:0000313|EMBL:AFJ55542.1}; EC=3.6.1.13 {ECO:0000313|EMBL:AFJ55542.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
ADP-ribose pyrophosphatase n=3 Tax=Pseudomonas RepID=I2BMQ9_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30877..31623
DNA (747bp) protein (249aa)
Putative lipoprotein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J811_9PSED
lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
lipoprotein rbh
Displaying items 1-30 of 57 in total

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