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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(3286..4257)

Top 3 Functional Annotations

Value Algorithm Source
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 323.0
  • Bit_score: 635
  • Evalue 4.60e-179
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 323.0
  • Bit_score: 633
  • Evalue 3.50e-179
  • rbh
tRNA dimethylallyltransferase n=3 Tax=Pseudomonas RepID=I2BY19_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 323.0
  • Bit_score: 633
  • Evalue 1.30e-178

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGAGTGCCTTGCCTCCCGCCATTTTCCTGATGGGCCCCACGGCCGCCGGCAAGACCGACCTGGCCATCGAGCTGACCAAGGTGCTGCCCTGCGAATTGATCAGCGTCGACTCTGCCCTGGTTTACCGGGACATGGATATCGGTACGGCCAAGCCGTCGAAGGCGCTGTTGGCCCAGTATCCGCACAAGTTGATCGACATCATCGATCCGGCGCAGAGCTATTCGGCGGCGGATTTTCGCACCGACGCCCTGGCGGCCATGGCCGAGATCACCGCGCGCGGCAATATCCCGCTGCTGGTGGGCGGCACCATGCTCTACTACAAGGCGTTGCAGGAAGGCCTGGCCGATATGCCGCCTGCCGATACCCAGGTGCGCGCCGAACTTGAAGAAGAGGCTGCGCGCCTTGGCTGGCAGGCCCTTCATGATCAGTTGGCGGCGGTAGATCCGGTGTCTGCGGCACGTATTCACCCCAATGACCCCCAGCGGCTCACACGCGCCCTGGAAGTCTGGCGCGTCAGTGGCCAGACCATGACTGAACATCGGCTGAAACAAAGTGCGCAAAGTACTGATGCAGGCGCATCTGGACAGTCACAATTGCCCTATACTGTGGCGAATCTGGCCATCGCTCCGGCAGATCGTCAGGTGCTGCATGAACGAATTGCACAAAGATTCACAATTATGTTGGAACAGGGGTTTGTGGACGAGGTCGTAGCACTGCGTTCAAGAGGTGACCTGCATGCAGGGCTGCCTTCGATACGTGCTGTAGGCTACCGCCAAGTCTGGGATCATCTGGATGGCAAGCTGACGTCAGCCGAAATGCAGGAGCGCGGCATCATCGCCACGCGCCAGTTGGCGAAGCGCCAGTTCACCTGGCTGCGCAGCTGGAGCGATTTGCACTGGTTGGACAGCCTGGACAGCGACAATCTGTCACGCGCCTTGAAATACTTGGGAACGGTCTCCATATTGAGCTGA
PROTEIN sequence
Length: 324
MSALPPAIFLMGPTAAGKTDLAIELTKVLPCELISVDSALVYRDMDIGTAKPSKALLAQYPHKLIDIIDPAQSYSAADFRTDALAAMAEITARGNIPLLVGGTMLYYKALQEGLADMPPADTQVRAELEEEAARLGWQALHDQLAAVDPVSAARIHPNDPQRLTRALEVWRVSGQTMTEHRLKQSAQSTDAGASGQSQLPYTVANLAIAPADRQVLHERIAQRFTIMLEQGFVDEVVALRSRGDLHAGLPSIRAVGYRQVWDHLDGKLTSAEMQERGIIATRQLAKRQFTWLRSWSDLHWLDSLDSDNLSRALKYLGTVSILS*