ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_31
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31791..33680)
DNA (1890bp) protein (630aa)
Phosphomethylpyrimidine synthase n=3 Tax=Pseudomonas RepID=I2BR58_PSEFL
thiC; thiamine biosynthesis protein ThiC Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
thiC; thiamine biosynthesis protein ThiC rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_32
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34131..35570
DNA (1440bp) protein (480aa)
Type I secretion outer membrane protein, TolC family n=3 Tax=Pseudomonas RepID=I2BU49_PSEFL
TolC family type I secretion outer membrane protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFJ57782.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_33
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35674..36951)
DNA (1278bp) protein (426aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JD27_9PSED
waaA; 3-deoxy-D-manno-octulosonic-acid transferase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
waaA; 3-deoxy-D-manno-octulosonic-acid transferase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_34
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36975..37865)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=3 Tax=Pseudomonas RepID=I2BQC3_PSEFL
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ56456.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_35
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37969..38304
DNA (336bp) protein (112aa)
Multidrug resistance protein, SMR family n=4 Tax=Pseudomonas RepID=I2BS04_PSEFL
SMR family multidrug resistance protein
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EIK60154.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_36
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38360..39535
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KSN2_9PSED
FAD dependent oxidoreductase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
FAD dependent oxidoreductase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_37
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39532..40344
DNA (813bp) protein (271aa)
Oxidoreductase, aldo/keto reductase family n=3 Tax=Pseudomonas RepID=I2BV87_PSEFL
oxidoreductase, aldo/keto reductase family rbh
Uncharacterized protein {ECO:0000313|EMBL:AFJ58170.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_38
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40386..41345
DNA (960bp) protein (320aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BMR9_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55552.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_39
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41373..42932)
DNA (1560bp) protein (520aa)
hldE; bifunctional protein HldE (EC:2.7.1.- 2.7.7.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hldE; bifunctional protein HldE (EC:2.7.1.- 2.7.7.-)
Bifunctional protein HldE n=3 Tax=Pseudomonas RepID=I2BKK5_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_40
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42955..44862)
DNA (1908bp) protein (636aa)
ATP-binding protein n=2 Tax=Pseudomonas RepID=U1TV02_PSEFL
msbA; lipid A export permease/ATP-binding protein MsbA Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
ATP-binding protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_41
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44883..46760
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KIS7_9PSED
O-antigen polymerase family protein/toluene tolerance protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
O-antigen polymerase family protein/toluene tolerance protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_42
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46809..47693)
DNA (885bp) protein (295aa)
glycosyltransferase family protein (EC:2.4.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
glycosyltransferase family protein (EC:2.4.-.-)
Putative glycosyl transferase n=2 Tax=Pseudomonas RepID=S6INB4_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_43
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47690..48838)
DNA (1149bp) protein (383aa)
Glycosyl transferase, group 1 family n=2 Tax=Pseudomonas RepID=I2BNA4_PSEFL
glycosyl transferase family protein rbh
glycosyl transferase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_44
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48924..50357)
DNA (1434bp) protein (478aa)
Putative deacetylase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J827_9PSED
N-acetylglucosaminylphosphatidylinositol deacetylase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
N-acetylglucosaminylphosphatidylinositol deacetylase family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_45
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50327..51223)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KSP3_9PSED
Mig-14 family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Mig-14 family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_46
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51224..52981)
DNA (1758bp) protein (586aa)
Carbamoyltransferase n=3 Tax=Pseudomonas RepID=I2BT18_PSEFL
carbamoyltransferase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
carbamoyltransferase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_47
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53124..53480)
DNA (357bp) protein (119aa)
Lipoprotein, putative n=3 Tax=Pseudomonas RepID=I2BX77_PSEFL
lipoprotein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
lipoprotein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_48
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53537..53878)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BTS1_PSEFL
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_49
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54053..56140
DNA (2088bp) protein (696aa)
TonB-dependent outermembrane receptor n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BZK9_PSEFL
TonB-dependent outermembrane receptor Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
TonB-dependent outermembrane receptor
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_50
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56239..57690)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BY79_PSEFL
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_51
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57690..58442)
DNA (753bp) protein (251aa)
Putative lipopolysaccharide biosynthesis-like protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KSP8_9PSED
lipopolysaccharide kinase, WaaP family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
lipopolysaccharide kinase, WaaP family
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_52
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58439..59173)
DNA (735bp) protein (245aa)
Putative heptose kinase WapP n=4 Tax=Pseudomonas RepID=I2BP18_PSEFL
wapP; heptose kinase WapP rbh
WapP protein {ECO:0000313|EMBL:AFJ56001.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_53
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59173..59979)
DNA (807bp) protein (269aa)
Lipopolysaccharide kinase WaaP n=3 Tax=Pseudomonas RepID=I2BTR7_PSEFL
waaP; lipopolysaccharide kinase WaaP
waaP; lipopolysaccharide kinase WaaP Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_54
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59976..61100)
DNA (1125bp) protein (375aa)
Lipopolysaccharide core biosynthesis protein WaaG n=3 Tax=Pseudomonas RepID=I2BSK2_PSEFL
waaG; lipopolysaccharide core biosynthesis protein WaaG rbh
waaG; lipopolysaccharide core biosynthesis protein WaaG Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_55
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61100..62161)
DNA (1062bp) protein (354aa)
rfaC; lipopolysaccharide heptosyltransferase I (EC:2.4.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
rfaC; lipopolysaccharide heptosyltransferase I (EC:2.4.-.-)
Lipopolysaccharide heptosyltransferase I n=3 Tax=Pseudomonas RepID=I2BWW5_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_56
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62163..63197)
DNA (1035bp) protein (345aa)
rfaF; lipopolysaccharide heptosyltransferase II (EC:2.4.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
rfaF; lipopolysaccharide heptosyltransferase II (EC:2.4.-.-)
ADP-heptose:LPS heptosyltransferase II n=2 Tax=Pseudomonas RepID=S6H3L8_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_57
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63419..66358)
DNA (2940bp) protein (980aa)
glnE; glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
glnE; glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KIU4_9PSED
Displaying items 31-57 of 57 in total

View Taxonomy