ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_56

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(62163..63197)

Top 3 Functional Annotations

Value Algorithm Source
rfaF; lipopolysaccharide heptosyltransferase II (EC:2.4.-.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 344.0
  • Bit_score: 702
  • Evalue 2.50e-199
rfaF; lipopolysaccharide heptosyltransferase II (EC:2.4.-.-) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 344.0
  • Bit_score: 700
  • Evalue 1.90e-199
ADP-heptose:LPS heptosyltransferase II n=2 Tax=Pseudomonas RepID=S6H3L8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 344.0
  • Bit_score: 702
  • Evalue 1.80e-199

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAATATTCTGATCGTTGGGCCCAGTTGGGTCGGTGACATGGTGATGGCACAGACACTGTTTCAGTGCCTGCGCCTGCGCTATCCAGACTGCCAGATCGACGTGCTCGCCCCTGAGTGGAGCCGGCCGATCCTCGAGCGCATGCCAGAGGTGCGTAAGGCCTTGAGCTTCCCGCTCGGCCACGGCGCCCTTGAGTTGGCGACCCGCCGACGTATCGGCAAGTCCATGGCGGGCCAGTACGACCAGGCGATCCTGCTGCCTAACTCGCTGAAGTCGGCGCTGGTGCCGTACTTTGCCGGTATCCCCAAGCGCACCGGCTGGCGCGGCGAGTTTCGCTATGTGCTGCTCAACGACGTGCGCACCCTGGATAAAGCCCGTTACCCGTTGATGATCGAACGCTTTATGGCTTTGGCCTACGAGCCGGGCACTGAACTGCCCAAGCCGTACCCGCGCCCCAGCTTGCAGATCGACCCGGTGACCCGCGACGCGGCGCTGGCCAAGTTCGGCCTGACCCTGGATCGGCCCGTATTGGCCTTGTGCCCGGGCGCCGAATTTGGCGAGTCCAAGCGTTGGCCGTCGGAGCATTACGCCAAAGTCGCCGAAACCAAGATCCGCGAAGGCTGGCAGGTGTGGTTGTTCGGCTCCAAGAACGATCATTCGGTGGGTGAAGACATTCGTCAGCGCTTGATCCCCGGCCTGCGTGAAGAGGCGGTGAACCTCAGTGGCGACACGTCCCTGGCCGAGGCCATCGACCTGTTGTCGTGCGCCGACTCGGTGGTGTCCAACGACTCCGGCCTGATGCATGTGGCGGCGGCGCTGAACCGTCCGCTGGTGGCCGTGTACGGCTCCACATCCCCAGGCTTCACTCCGCCGTTAGCCGACAAGGTCGAAGTGGTGCGCCTGGGCCTGGATTGCAGCCCGTGCTTTGACCGTACTTGCCGCTTCGGCCACTACAACTGCCTGCGCCAGTTGCTGCCCCAGCCGGTAACCGATGCCCTGCAGCGTTTGCAGGGCGACGTGGTCGAGGTTCATTGA
PROTEIN sequence
Length: 345
MNILIVGPSWVGDMVMAQTLFQCLRLRYPDCQIDVLAPEWSRPILERMPEVRKALSFPLGHGALELATRRRIGKSMAGQYDQAILLPNSLKSALVPYFAGIPKRTGWRGEFRYVLLNDVRTLDKARYPLMIERFMALAYEPGTELPKPYPRPSLQIDPVTRDAALAKFGLTLDRPVLALCPGAEFGESKRWPSEHYAKVAETKIREGWQVWLFGSKNDHSVGEDIRQRLIPGLREEAVNLSGDTSLAEAIDLLSCADSVVSNDSGLMHVAAALNRPLVAVYGSTSPGFTPPLADKVEVVRLGLDCSPCFDRTCRFGHYNCLRQLLPQPVTDALQRLQGDVVEVH*