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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_12

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(10778..11320)

Top 3 Functional Annotations

Value Algorithm Source
orn; oligoribonuclease (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 363
  • Evalue 3.80e-98
  • rbh
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1284393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 180.0
  • Bit_score: 363
  • Evalue 1.90e-97
Oligoribonuclease n=5 Tax=Pseudomonas RepID=C3KDV5_PSEFS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 363
  • Evalue 1.30e-97

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Taxonomy

Pseudomonas sp. FH4 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCAAAACCCACAGAACCTGATTTGGATCGATCTGGAAATGACCGGTCTGAACCCCGACACCGACGTCATCATCGAGATGGCGACCATTGTCACCGACAGCAACCTCAACACCTTGGCCGAAGGCCCGGTGATCGCCATCCACCACAGCGACGCCGTACTCGCCACCATGGACGAGTGGAACACCCGCACCCACGGTAACTCCGGGCTGACCCAGCGCGTGCGCGACAGCCGCATCAGCATGGCCGAAGCCGAGGCCGAAACCATTGCCTTCCTGGAAAAATGGGTGCCCAAGGGCAAATCGCCGATCTGCGGCAACAGCATCTGCCAGGACCGTCGCTTCCTTTATACGCACATGAAGGGGCTGGAAAGTTACTTCCATTACCGCAACCTGGACGTGTCGACCTTGAAGGAACTGGCTGCGCGTTGGGCCCCGGAAGTCAAAGACAGCTTCCATAAAGGCAGCACGCACCTGGCGCTGGATGATATTCGCGAGTCGATTGCCGAGTTGCAGCATTACCGCAAGCATTTCATCAAGGCTTGA
PROTEIN sequence
Length: 181
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMKGLESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA*