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scnpilot_p_inoc_scaffold_545_13

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(8595..9410)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKI5_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 258.0
  • Bit_score: 364
  • Evalue 7.00e-98
  • rbh
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 258.0
  • Bit_score: 364
  • Evalue 2.00e-98
ABC transporter related {ECO:0000313|EMBL:ACS17283.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 258.0
  • Bit_score: 364
  • Evalue 9.80e-98

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGCAGTCATTCGGAGTCGTGCGCGATGCGCGCAAGGTATTCCCCGCCAACGAACTGGGGGGGCGCGCCACGGAACCTCTGGTCGCGCTGGATAACGCCAGCTTCACCTTCGACCGGGGCGAGTTCGTCTCGCTGCTCGGTCCCAGCGGCTGCGGCAAGACCACGCTGCTGCGCATCGTGGCCGGCCTGATCTCCAAGACCTCGGGCAGCATCGTGGTCGATGGGCACGAGGTGACCGGACCCTATGGCGACTACGGTTTCGTGTTCCAGTCGCCGTCGCTCATGCCCTGGCGCAACGTGCTGGACAACGTGTTGTTCCCCATGGAAGTGCTCAAGCGGCGCACGCCCCGGGCCGTGGCGCGCGCGCACGAGCTGCTCGACCTGGTGGGGCTGGGCGGGTTCAGCCGCTCGCGGCCGCATCAGTTGTCCGGCGGCATGCAGCAGCGCGTGGCGCTGTGCCGCGCGCTCATCCATTCGCCCAAGCTGCTGCTGATGGACGAACCCTTCGGCGCGCTGGACGAACTCACCCGGCTCGACATGAACGATCTGCTGCTTCGCATCCGGGCCGAGACGCAGGCGTCCGTCCTGTTCGTCACCCACTCGATTTCCGAGGCCGTGTACCTGGCCGACAAGGTGTTGGTGTTCAGCCGCCGGCCCGCCCGCGTGGCGGCCGAGATCACGGTGTCGCTGCCGGCGCCGCGCACGCAGGCCTCGCGCTTCTCGGCTGAGTTCAGCGCCGCCGAGCGCAAGGCCTGCGAGGCCTTGGGCGTGCTGACCGCGCCCGCCTCGGCCGCCGTCCAGGAGCGTGCCGCATGA
PROTEIN sequence
Length: 272
MQSFGVVRDARKVFPANELGGRATEPLVALDNASFTFDRGEFVSLLGPSGCGKTTLLRIVAGLISKTSGSIVVDGHEVTGPYGDYGFVFQSPSLMPWRNVLDNVLFPMEVLKRRTPRAVARAHELLDLVGLGGFSRSRPHQLSGGMQQRVALCRALIHSPKLLLMDEPFGALDELTRLDMNDLLLRIRAETQASVLFVTHSISEAVYLADKVLVFSRRPARVAAEITVSLPAPRTQASRFSAEFSAAERKACEALGVLTAPASAAVQERAA*