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scnpilot_p_inoc_scaffold_8948_5

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(4775..5080)

Top 3 Functional Annotations

Value Algorithm Source
Membrane fusion protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXV7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 100.0
  • Bit_score: 130
  • Evalue 8.30e-28
Membrane fusion protein {ECO:0000313|EMBL:EYR79399.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 100.0
  • Bit_score: 130
  • Evalue 1.20e-27
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 101.0
  • Bit_score: 123
  • Evalue 4.80e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTCAAGGTCTATCCCGAGATCACCGATGGCCGCGTCACCGCCGATGTCGAGGTCGCCGGGATCGGCGACTATTTCGTCGGCGAGCGGACGCTCGTCACCATCCCCGTCGGCCGCCGCGATGCTCTGCTCGTGCCGGTCGCCGCGCTCTCCTCCCGCCACGGCGTCGATTATGTCCGCCTCGCGGATGGCGCCGAAGTGGCGGTGATCCTCGGCGAGCGGCGCGATAGCGGCGGCGACGCGCGCATCGAAATCCTCACCGGGCTTCGTCCCGGCGACCATGTCCTCGTTCCGGACGGCACGAAATGA
PROTEIN sequence
Length: 102
VKVYPEITDGRVTADVEVAGIGDYFVGERTLVTIPVGRRDALLVPVAALSSRHGVDYVRLADGAEVAVILGERRDSGGDARIEILTGLRPGDHVLVPDGTK*