ggKbase home page

scnpilot_p_inoc_scaffold_4159_12

Organism: SCNpilot_P_inoc_Burkholderiales_66_5

near complete RP 49 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 11 / 38
Location: comp(10733..11551)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Dyella ginsengisoli RepID=UPI00034B0202 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 272.0
  • Bit_score: 520
  • Evalue 1.00e-144
  • rbh
NODE_94, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97249.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 271.0
  • Bit_score: 503
  • Evalue 1.40e-139
integrase core domain protein similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 270.0
  • Bit_score: 464
  • Evalue 2.40e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGTCACGATCCAGCAGGGACTGCGCAATGACGGCGTGGCGGTCTCGATGTCGCAGTTGTGCCGCTGGTTCGACGTGCCGCGTCGGACGGTTTACTACCGGCCAGTGAAAGCTGCACCGGCGGTGCGGCCGGAGCTGGCCGGCCCGATCAAGCAACTGATCGAGGCCGAGCCCTCGTTTGGCTATCGCACGGTCGCCGGATTGCTGGGCATGAACAAGAACACGGTGCAACGGATCTTCCAGTTGATGGGCTGGCAGGTACGCAAACGCGCTGTGGGCATGCGTCCCCGCATCCAGGCACTGCCCTCGGTGGCCTCGGCGCCGAACCAGCGTTGGGCGACCGATCTGTGCCGGATCTGGGGCGGCCGTGATGGTTGGCTCACATTGGCGCTGGTGATCGACTGCCACACCCGCCAACTGCTGGGATGGCATCTGTCGCGAACCGGCCGTGCGACGACGGCGGCAGCGGCTTTGGAGCAGGCGTTGATCACGCGCTTCGGTACGCTCGGCCGCGTTCCCGAACCGTTCCTGCTGCGCTCGGATAACGGACTGGTCTTCACCAGCCGCCACTACACGCGCCTGGTGCGCAGCTACGGATTACGGCAGGAATTCATCACCCCGCACTGTCCACAGCAGAACGGCATGGTCGAACGCGTCATACGGACGCTGAAGGAGCAATGCGCACACCGGCACCGCTTCGAAAGCCAACAGCATGCAATGCGCGTGATCGGCGACTGGATCCAGTTCTACAACCACCGGCGGCCGCATCAGGCGCTGGGCATGAAGACACCCGCCGAGGCATACGCTTTAGCGGCCTAA
PROTEIN sequence
Length: 273
MVTIQQGLRNDGVAVSMSQLCRWFDVPRRTVYYRPVKAAPAVRPELAGPIKQLIEAEPSFGYRTVAGLLGMNKNTVQRIFQLMGWQVRKRAVGMRPRIQALPSVASAPNQRWATDLCRIWGGRDGWLTLALVIDCHTRQLLGWHLSRTGRATTAAAALEQALITRFGTLGRVPEPFLLRSDNGLVFTSRHYTRLVRSYGLRQEFITPHCPQQNGMVERVIRTLKEQCAHRHRFESQQHAMRVIGDWIQFYNHRRPHQALGMKTPAEAYALAA*