ggKbase home page

scnpilot_p_inoc_scaffold_1719_11

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 7297..8895

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination protein NusA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA60_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 531.0
  • Bit_score: 880
  • Evalue 9.70e-253
  • rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.; similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 534.0
  • Bit_score: 975
  • Evalue 4.00e-281
transcription termination protein NusA similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 531.0
  • Bit_score: 880
  • Evalue 2.70e-253

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGGCCGTTAGCGCGAACCGCCTTGAGCTGTTGCAGATTGCTGATGCTGTTGCCCGCGAAAAGTCGATCGACCGCATGGTGGTGATCGAGGCCATGCAGGACGCCATGGAGAAGGCCGCCAAGGGCCGCTATGGCGCCGAGACCGAGATCAAGGTGGAGATCAATCCGCGCTCTGGCGAAACCCGCATGTGGCGCCTGCTCGAGATCGTCGACTCCGTCGAAGAACCCTCCCGCCAAGTCAGCCTCAAGCTGGCCCAGGTCAAGAACCCTACCGCCAAGGTTGGTGACTTCCTCACCGAGCCGCTGCCGCCGATGGAATTCGGTCGTATCGCCGCCCAGTCCGCCAAGCAGGTGATCGTGCAGAAGGTGCGCGATGCCGAGCGCGACCGCATGTTCGAGGAATATACCAGCCGCGTCGGCGAGATCGTCAATGGCACGGTCAAGCGCGTCGAATATGGCAATGTCATCGTCGACCTCGGCCGTGGCGAAGCCATTATCCGCCGCGACGAGCTGATCCCGCGCGAAATGTTCCGCTACGGCGATCGCGTGCGCGCCTATATCTATGACGTGCGCCGCGAACAGCGCGGTCCGCAGATTTTCCTCTCACGCACGCATCCGCAGTTCATGGCAAAGTTGTTCATGCAGGAAGTGCCCGAGATCTATGATGGCGTGATCACCATCCGCTCCATCGCCCGCGATCCCGGCTCCCGGGCCAAGATTGCCGTGACATCGAACGATTCTTCGATCGATCCGGTCGGCGCCTGCGTTGGTATGCGCGGCTCTCGCGTTCAGGCGGTCGTCGCCGAATTGCAGGGCGAAAAAATCGACATCATTCCCTGGACCGATACCATTGCCGACCTCGTGGTCTCGGCGCTGCAGCCGGCCGATGTCGCCAAGGTGGTGCTCGACGAACAGGCCGAGCGCATCGAAGTCGTGGTTCCCGACGAGCAGCTCTCGCTTGCCATCGGTCGCCGCGGTCAGAATGTGCGACTTGCTTCGCAGCTGATCGGCTGGGATATCGACATCCTGACCGAGCAGGAAGAAAGCGAACGCCGCCAGAAGGAATTCACCGAGCGCTCGACCCTGTTCATGGAAGCACTCGACGTCGACGAGATGGTGGCCCAGTTGCTCGCCTCCGAGGGTTTCTCCTCGGTCGAGGAACTGGCCTATATCGAACCGGGTGAGATTGCCTCCATCGATGGCTTTGACGAAGAGACCGCCGGCGAAATTCAGAACCGCGCGGCTGAATACCTGGCCGAGATCGATCGCAAGTTCGACGAAGAGCGCAAGGCGCTGGGCGTCGAGGACGAACTCTACGAAATCGCCGGCCTCAATGCCGCCATGCTGGTGGCTCTGGGCAAGGACGAGGTGAAGTCGGTTGAAGATTTCGCCGGTTGCGCCGCCGATGACCTGGTGGGCTGGACTGAACGCAAGGATGGCGAAACCAAGCGCTACGAAGGGACCTTCAAGGACTTCCCCATCTCCCGCGAAGAAGCCGAGGACATGATCATGCAGGCCCGCATCCGGGCTGGCTGGATCAGTGCCGAGGATCTTCCGGCCGAAGACGATGTGGTCGAAACCGAGGAGGAGGCGGTCTAA
PROTEIN sequence
Length: 533
MAVSANRLELLQIADAVAREKSIDRMVVIEAMQDAMEKAAKGRYGAETEIKVEINPRSGETRMWRLLEIVDSVEEPSRQVSLKLAQVKNPTAKVGDFLTEPLPPMEFGRIAAQSAKQVIVQKVRDAERDRMFEEYTSRVGEIVNGTVKRVEYGNVIVDLGRGEAIIRRDELIPREMFRYGDRVRAYIYDVRREQRGPQIFLSRTHPQFMAKLFMQEVPEIYDGVITIRSIARDPGSRAKIAVTSNDSSIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWTDTIADLVVSALQPADVAKVVLDEQAERIEVVVPDEQLSLAIGRRGQNVRLASQLIGWDIDILTEQEESERRQKEFTERSTLFMEALDVDEMVAQLLASEGFSSVEELAYIEPGEIASIDGFDEETAGEIQNRAAEYLAEIDRKFDEERKALGVEDELYEIAGLNAAMLVALGKDEVKSVEDFAGCAADDLVGWTERKDGETKRYEGTFKDFPISREEAEDMIMQARIRAGWISAEDLPAEDDVVETEEEAV*