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scnpilot_p_inoc_scaffold_2864_16

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 10619..11566

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=46914 species similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 316.0
  • Bit_score: 609
  • Evalue 2.70e-171
Transcription termination factor Rho n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Q6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 316.0
  • Bit_score: 573
  • Evalue 1.10e-160
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 316.0
  • Bit_score: 573
  • Evalue 3.20e-161

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGCAGAATATCAAGCTCAGCGAGCTTAAGGCCAAATCGCCGGCAGAATTGTTGGCATTCGCTGAAGAACTCGAGGTCGAAAACGCTTCGACCATGCGCAAACAGGAATTGATGTTTGCCATTCTCAAGGAACTGGCGGCTCAGGATATCAACATCGTCGGCGAAGGCGTGGTCGAGGTGCTGCCCGACGGCTTCGGCTTCCTGCGCTCTCCCGATGCCAATTACCTGCCTGGCCCGGACGATATCTATGTCAGCCCCAGCCAGATTCGCCGTTTCGGTCTGCGCACCGGTGACACGGTCGAGGGCGAAATCCGCTCCCCCAAGGAGGGCGAACGCTATTTCGCGCTTCTAAAGGTCAACACCATCAATTTCGAAGATCCCGAGGCGGTCCGCCACAAGGTCAACTTCGACAACCTGACGCCGCTCTATCCCGAAGAGCGGTTGCGCATGGAACTGCCCGATCCCACCCTGCGGGATCGCTCTGCGCGTCTTCTCGACCTGGTGGCGCCGCTCGGCAAGGGTCAGCGCGCCCTGATTGTTGCGCCTCCCCGTACCGGTAAGACGGTATTGTTGCAGAATATTGCACAATCGATCGCGACCAATCACCCCGAATGCTATCTGATCGTTCTGCTGATCGATGAGCGTCCGGAAGAAGTGACCGACATGCAGCGCTCGGTGCGCGGCGAAGTCATTTCCTCCACCTTCGACGAGCCGGCCAGCCGCCACGTGCAGGTGGCCGAGATGGTCATCGAAAAGGCCAAGCGCCTGGTGGAGCACAAGCGCGACGTGGTGATCCTGCTCGATTCCATCACCCGTCTCGGGCGCGCCTACAACACCGTGGTGCCGTCCTCGGGCAAGGTGCTGACCGGTGGCGTCGACGCCAATGCCCTGCAGCGTCCCAAGCGCTTTTTCGGCGCGGCGCGCAATATCGAGGGCGGCGGCTCGCTG
PROTEIN sequence
Length: 316
MQNIKLSELKAKSPAELLAFAEELEVENASTMRKQELMFAILKELAAQDINIVGEGVVEVLPDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTVEGEIRSPKEGERYFALLKVNTINFEDPEAVRHKVNFDNLTPLYPEERLRMELPDPTLRDRSARLLDLVAPLGKGQRALIVAPPRTGKTVLLQNIAQSIATNHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPASRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEGGGSL