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scnpilot_p_inoc_scaffold_3304_6

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 5935..6792

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 285.0
  • Bit_score: 543
  • Evalue 1.20e-151
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 285.0
  • Bit_score: 543
  • Evalue 3.20e-152
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:AHF14910.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 285.0
  • Bit_score: 543
  • Evalue 1.60e-151

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGACAGTTAAAAATAGCAACACAAATCACTAACCGCGACTCGCAGGCGGTTGAGAAATATCTGCAGGAAATCTCCAAAATATCAATGATCACTCCTGAAGAGGAAACAGTGCTGGCACAGCGCATTAAAATGGGGGATCAGAGAGCTTTGGATAAACTGGTGCAGGCTAACCTCAGGTTCGTTGTTTCCGTTGCTAAACAATATCAGCACCAGGGGTTATCGCTCAGCGACCTTATCAATGAAGGGAATCTTGGTTTGATCAAGGCTGCCCAGCGCTTCGATGAAACCAAAGGTTTTAAATTCATCTCTTACGCAGTATGGTGGATCCGCCAGTCTATCCTGCAGGCATTGGCAGAACAGGGACGTCTCGTTCGCCTGCCGCAAAACAAGATTGGCACCTACAACAAAGCGAATAAAGCTTATATGGCTTTTGAGCAGGAGCATGAGCGTGAGCCGAGCACAGAAGAGCTGGCAGAGCTTCTTGAAATGAGTGAGACAGAGATCAACAATATTTTCCAGAGCAATACCCGTCATACTTCCCTGGATGCTCCTGTGCATGAGGCAGAAGATGTGGCTATGGGAGACCTCCTGGAAGGCGGCGCAGAGACCGATGATGACGTAATGAAGGATTCTCTCCGCAATGAGATCCGCCGGGTATTAAAATCACTAAGCCCACGCGAAGCGGAGATCGTAAACGCTTATTTCGGGCTGGATGGCGAAAATGGTGTGACCATTGAGCAAATCGGTCAGAAATATGATTTAACGAAAGAGCGTATCCGCCAGATCAAGGAAAGAGCCATCAAGCGCCTGCAGAAAGCACGCTACAGCAGCTCGTTGAAAGCTTATTTGGGATAA
PROTEIN sequence
Length: 286
MRQLKIATQITNRDSQAVEKYLQEISKISMITPEEETVLAQRIKMGDQRALDKLVQANLRFVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAEQGRLVRLPQNKIGTYNKANKAYMAFEQEHEREPSTEELAELLEMSETEINNIFQSNTRHTSLDAPVHEAEDVAMGDLLEGGAETDDDVMKDSLRNEIRRVLKSLSPREAEIVNAYFGLDGENGVTIEQIGQKYDLTKERIRQIKERAIKRLQKARYSSSLKAYLG*