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scnpilot_p_inoc_scaffold_1285_25

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(24980..25120)

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TM97_ACIAC similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 44.0
  • Bit_score: 81
  • Evalue 2.00e-13
proX; glycine betaine transporter periplasmic subunit similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 44.0
  • Bit_score: 81
  • Evalue 5.60e-14
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ABM32085.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 44.0
  • Bit_score: 81
  • Evalue 2.80e-13

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Taxonomy

Acidovorax citrulli → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
GACATCAACGCGCAGAACCTGGCCATGAAGAACGGCCAGAACCAGAACGCCGACATCGAACGCCACGTGGACGGCTGGATCCGCGCGCACCAGAAGACCTTCGACGGCTGGGTGGACAACGCCAAGGCAGCCGCCCGGTAA
PROTEIN sequence
Length: 47
DINAQNLAMKNGQNQNADIERHVDGWIRAHQKTFDGWVDNAKAAAR*