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scnpilot_p_inoc_scaffold_1365_17

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(19542..20960)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RPU1_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 468.0
  • Bit_score: 705
  • Evalue 3.80e-200
  • rbh
RND efflux system, outer membrane lipoprotein {ECO:0000313|EMBL:EHN65836.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 468.0
  • Bit_score: 705
  • Evalue 5.30e-200
RND efflux system, outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 468.0
  • Bit_score: 703
  • Evalue 5.30e-200

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGACGGCGAAACCCCTTCTTTGCACGGCAGCGCTGCTGCTGGCGGGCTGCAACCTCGCGCCCACGCACCAGACACCGCCGCTGCCCGTTCCGGAGACCGTCTCCGCCCTCTCCGCCCAGGACGCGCCCGCGCAGGCGGGCGAAGCCGCGCTGCAGGAAGCCCACGGCATGCAGTGGCTGCAATCGGCCGAACTGCGCGAGGTCGTGGCCCTGGCGCTGACGCACAACCGCGACCTGCGCGTGGCGGTGGAAAACATCGAGAAGGCCCGCGCCCAGTACGGCATCACCCGCGCCGACCTGCTGCCTGGCGTCAACGCCCAGGCCCAGGCCAGCCGCGCCCGCACCGCCGCCGACCTGAACGCCAGCGGCAGCGCCACGCTGGCCACGCAGTACACGGCGCAGCTCGGCTTCGCCAGCTACGAGCTCGACCTGTGGGGGCGCGTGCGCAACCTGAACGAAGCGGCGCTGCAGCAATTCCTGCAAAGCCAGGAGAACCAGCGCAACGTGCGCATCGGCCTGGTGGCCGACGTGGCCAATGCCTGGCTCACGCTGGCGGCCGACCAGGCGCGCCTGCAACTGGCCCGCGACACCCTGGCCAGCCGCGCCAAGGCGCTGGAGCTGACGCAGCGCATGCACCAGCTCGGCGCCATCTCGGGCCTGGTGCTGGCGCAGAACCAGACCACGGTGGACACCGCGCGCGGCGACGTGGCCAGCACCACCGCCCAGGCCGAGCGCAGCCGCAACGTGCTGCAGCTGCTGGCGGGCGGCCCCGTGCCGGAACGCCTGCTGCCCACCGCCCAAACCCTGGGCCTGCGGGAATCGGCCGACGTGGCCGCGCTGCGCCCCGTGCCAGTCCCGCTGCCCTCCAGCGTGCTGCTGCAGCGCCCCGACGTGCAGGCGGCCGAGAGCGCCCTGCGCGCCATGGACGCCAACATCGGCGCGGCGCGCGCGGCGCTGTTCCCCACCATCAGCCTCACGGCCAGCGTGGGCACGGGCAGCACCGCGCTGGAACGCCTGTTCGGCCACGACAACGGCACCTGGAGCTTCGTGCCGCTGGTGCGCCTGCCCCTCTTCGACGCGGGGCGCAACCGCGCCGGCGTGCAGGTGGCCGAAAGCAACCAGCGCATCGCCGTGGCGCAGTACGAGAAAGCCGTGCAGACGGCGTTCCGCGAAACCGCCGACGTGCTGGCCGACCGCGCGCAGTGGAGCGAACGCCTGGCGGCCCAGGCCAGCATGGTGGCGAATACGCAGAAGGCGTTCGACTTGTCGGACGCGCGCTTCAAGGCCGGGGTGGACAACTACCTCGCGGTGCTGGACGCGCAGCGCAGCCTCTACGCCGCGCAGCAGACGCTGATCGGCCTGCGCCTGTCGGAGCAGGTCAACCGCGTGACGCTGTGGAAGGTGCTCGGCGGGGAGTGA
PROTEIN sequence
Length: 473
MTAKPLLCTAALLLAGCNLAPTHQTPPLPVPETVSALSAQDAPAQAGEAALQEAHGMQWLQSAELREVVALALTHNRDLRVAVENIEKARAQYGITRADLLPGVNAQAQASRARTAADLNASGSATLATQYTAQLGFASYELDLWGRVRNLNEAALQQFLQSQENQRNVRIGLVADVANAWLTLAADQARLQLARDTLASRAKALELTQRMHQLGAISGLVLAQNQTTVDTARGDVASTTAQAERSRNVLQLLAGGPVPERLLPTAQTLGLRESADVAALRPVPVPLPSSVLLQRPDVQAAESALRAMDANIGAARAALFPTISLTASVGTGSTALERLFGHDNGTWSFVPLVRLPLFDAGRNRAGVQVAESNQRIAVAQYEKAVQTAFRETADVLADRAQWSERLAAQASMVANTQKAFDLSDARFKAGVDNYLAVLDAQRSLYAAQQTLIGLRLSEQVNRVTLWKVLGGE*