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scnpilot_p_inoc_scaffold_7978_2

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(2691..3761)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8Z0_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 350.0
  • Bit_score: 308
  • Evalue 1.00e-80
  • rbh
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 350.0
  • Bit_score: 308
  • Evalue 2.90e-81
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU37313.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 350.0
  • Bit_score: 308
  • Evalue 1.40e-80

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGATGCCCGCCGCCCCGCCCGCCACCCCGCCCGGTGACGCCGCCGCGCGCCAGCGCCAGGCGTTGGTGCGCTGGTTCATGCGCCGCCACGGCGCGCCCGCCAGTGCCCCGTGGAGCGCCGCGGACGAGCAGGCCTTCCAGCAATGGCTGGGCAGCCCGGCCAACCGGCAGGCCTACGCGCGCTGGCAGGCCGACTGGGCGCTGATCGACGCCATGCCACCTGCCGCCGCCGACCGCCTGCGCGCCATGGCCGAGGCCGACCTGGCGGCGCAGCGCGCCGCCGCCGCGCCACCGGCCCCGGGCCGCAGGCAATGGCTGGGCCAGGGGCTGGCCCTGGCGGGCGTGGCGGGCATGGTGCTGGGCAGCGGCTGGCTCGGCTGGCGCCACCTGCAGGCCCAGCCCGTGTTCGCGCAGGCGTTCAGCACCCGCCAGGGCCAGCAGATCGCGGCCACGCTGCCCGACGGCTCCACCATCCGCCTGGACACCGCCACCACGCTGCAGGTGGCACTGTTCCGCGGCCGGCGCGAGGTGCGCCTGGCGCAGGGGCAGGCCTTCTTCGCGGTGGCTGCCGACGCGCGGCGGCCCTTTTCCGTCATGGCGGGCGGGGCCGTGGTCACCGTGCTGGGCACGCGCTTCGCGGTGCGCTACACGCCTGGCGTGCCGGGCCGCGAGGGTGTGGAGGTGGCAGTGGAGGAAGGCCGCGTGCGCGTGGCGCGCGGCGAACCCGGCGGCGGCGCGGCGCAGCCGTTCGAGCTGGCCGCGGGCCAGACGCTGCGGCTGCCGCCCGGCGGCGCCGACCCGGTGCCCGGCGCCGTGCCCGCCGCGGGCGTGGCGCCGTGGCGCAGCATGCCCCTGAGCTTCAGCGACGTGCCGCTGCGCGAGGCCGTGGCCGAGATGGAGCGCTACGCCAGCCTGGGCATCGCCGCCATCGACCCGGCCGTGGCCGGCCTGCGGCTGAGCGGCACCTTCGACCCGCGCGACCCCGAGGCCACCCGGCGCCTGCTGGCGCGCGCCCTGCCCATCCGGCTGGAGGACAGCGCGCAGGGGGTGCACGTGCGGCCGGTGCGCTGA
PROTEIN sequence
Length: 357
MMPAAPPATPPGDAAARQRQALVRWFMRRHGAPASAPWSAADEQAFQQWLGSPANRQAYARWQADWALIDAMPPAAADRLRAMAEADLAAQRAAAAPPAPGRRQWLGQGLALAGVAGMVLGSGWLGWRHLQAQPVFAQAFSTRQGQQIAATLPDGSTIRLDTATTLQVALFRGRREVRLAQGQAFFAVAADARRPFSVMAGGAVVTVLGTRFAVRYTPGVPGREGVEVAVEEGRVRVARGEPGGGAAQPFELAAGQTLRLPPGGADPVPGAVPAAGVAPWRSMPLSFSDVPLREAVAEMERYASLGIAAIDPAVAGLRLSGTFDPRDPEATRRLLARALPIRLEDSAQGVHVRPVR*