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scnpilot_p_inoc_scaffold_192_116

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(121454..122530)

Top 3 Functional Annotations

Value Algorithm Source
sigma E regulatory protein, MucB/RseB n=1 Tax=Acidovorax radicis RepID=UPI000237669E similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 328.0
  • Bit_score: 586
  • Evalue 1.90e-164
  • rbh
sigma E regulatory protein MucB/RseB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 358.0
  • Bit_score: 695
  • Evalue 4.20e-197
sigma E regulatory protein MucB/RseB similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 359.0
  • Bit_score: 517
  • Evalue 4.10e-144

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGAGCTACCCGGGAGTTTTTTGCGTTTGGTTGAAAGCACTGCCGCAGCAGTTCAAACACGGGGTGGTTGCTGCCCTGTGTGTGACAGGACTCTCCGTATCGGCAGGGGCCTCGCCGGCTGAGGGGGCCGTTTCTTCTGCAGCAGAGGCGGCTCCCGCGACTGCGGAACGCAGTATTCTGCAATGGATCGAGCGCATGCACAGCGCGCCCTGTGCGCGCCCGTATGCCGGTACCTTTGTGGTGCTGGCCGCCTCCGGGGCGATGGCCAGTTCACGCATCTGGCACGCCTGTGAAGGGGCGCAGCAGATGGAGCGCGTGGAGGCTCTCAGTGGCACTCCCCGGACCATTTTTCGGCGCAACGACGAGGTACGTACGTTCTGGCCCCAGTCGCGTGTGGTGCGGTCGGATCGACGGGATGCCTCTGGGCTGTTTCCACGAGTTCCGGTGGTTGAGGGCACTTCCATATCCCAGTTCTATGCCGCACGCCCTGTGGGCCAAGAGCGCGTTGCTGGATTTGTTGCCGACGTGGTGTGGTTCAAACCCGTGGACTCGCTGCGTTTTGGCTACAAGCTGTGGAGCGAGCGGGAGACCGGTCTGGTCGTGAAGCTGCAGACCTTGGGCGCGAACGGACGCGTTCTGGAGCAGGCTGCATTCTCGGAGTTGGACTTGAACGCCCCCGTTCGAGTGGAGCAGCTTTCGCGCCTGATGGACGCGACCGCTGGTTACAAGGTGGTGGCGCCGGTCGTGGTCAAGACCACGGCCACGGCCGAGGGCTGGGTGCTTCGTCAGCCGGTTGCTGGCTTTGTTCCGGTGAGCTGCCATCGGCGCGCTGTGTCTGCTGACGACGGTGCGCAGGGTGTCTTGCAGTGCCTGTACTCCGATGGTCTTGCATCGGTATCGCTGTTCATCGAGACCTTTGATCCCCAGCGACACCCCTCCCAGCCCCAGGTCTCGGGTATGGGGGCGACGCAGCTTCTTGCGCAACGGGTCTTGCCCGATGTATGGCTCACAGCAGTGGGGGAGGTTCCTTTGCAGACCCTTCGCCTGTTTGCGGGTCAATTGGAGCGCACACGCTGA
PROTEIN sequence
Length: 359
MSYPGVFCVWLKALPQQFKHGVVAALCVTGLSVSAGASPAEGAVSSAAEAAPATAERSILQWIERMHSAPCARPYAGTFVVLAASGAMASSRIWHACEGAQQMERVEALSGTPRTIFRRNDEVRTFWPQSRVVRSDRRDASGLFPRVPVVEGTSISQFYAARPVGQERVAGFVADVVWFKPVDSLRFGYKLWSERETGLVVKLQTLGANGRVLEQAAFSELDLNAPVRVEQLSRLMDATAGYKVVAPVVVKTTATAEGWVLRQPVAGFVPVSCHRRAVSADDGAQGVLQCLYSDGLASVSLFIETFDPQRHPSQPQVSGMGATQLLAQRVLPDVWLTAVGEVPLQTLRLFAGQLERTR*