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scnpilot_p_inoc_scaffold_579_23

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 32012..32581

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6) Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 379
  • Evalue 2.00e-102
RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 189.0
  • Bit_score: 360
  • Evalue 3.40e-97
RNA polymerase sigma 70 n=1 Tax=Acidovorax radicis RepID=UPI0002375173 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 189.0
  • Bit_score: 377
  • Evalue 9.50e-102
  • rbh

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGGCAACCGAACGAGAACTCTCCGACTTCCTCAAAAGTGTAGAAAAGCGCGCATTCAAGCGCTCGGTCTACCACGTTCGCAATGAGGAAGCGGCGCTCGACATCGTGCAGGACAGCATGCTCAAGCTGGCAGAGCACTATGGTGACAAGCCGGCGGCTGAGCTGCCCATGCTCTACCAGCGCATACTTTCCAACTGCACGCTGGACTGGTTTCGCCGCCAAAAAACCCGCAATGCACTGTTTTCGAGCATGAGCGACTTTGAAGGTCCCGGCGAAGATGGCATGGATTTTGATCTGCTTGAAGCGTATTCAGGACCGGAAAATGGGGAACGGGCAGAGAGCGCCGAGGATCTGACCCGGCGGGCGCAGATCTTTCACGGGATCGAAGCCGAGATTGCCGAGCTGCCCCCACGTCAACGGGAAGCGTTCCTGATGCGTTACTGGGAAGAAATGGATGTAGCAGAAACGGCAGCCGCCATGGGCTGCTCCGAAGGCAGCGTCAAAACGCACTGTTTTCGTGCCATACAAACCCTCAGCAAGGCACTGAAGGCCAAAGGAATCGAGCCATGA
PROTEIN sequence
Length: 190
LATERELSDFLKSVEKRAFKRSVYHVRNEEAALDIVQDSMLKLAEHYGDKPAAELPMLYQRILSNCTLDWFRRQKTRNALFSSMSDFEGPGEDGMDFDLLEAYSGPENGERAESAEDLTRRAQIFHGIEAEIAELPPRQREAFLMRYWEEMDVAETAAAMGCSEGSVKTHCFRAIQTLSKALKAKGIEP*