ggKbase home page

scnpilot_p_inoc_scaffold_818_28

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 35348..35962

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAS9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 196.0
  • Bit_score: 333
  • Evalue 1.30e-88
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 187.0
  • Bit_score: 364
  • Evalue 7.40e-98
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 196.0
  • Bit_score: 333
  • Evalue 3.70e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGAGTCCCTCCCATAATGCGCGGGTGCCATCCACCCCATTCCCCGCCACCATGGAGGACTCCGACGAAGCGCTGATGTTGCGCTACGCCGCAGGAGAATTGGGCGCGTTCGATGTACTGTATGGGCGGCACGAACTGGCGGTGTGGCGGTTTGTGTTTCGCAGCGTCAAGGTGCAGGCCGAGGCCGATGACCTGCTGCAGGACGTGTGGTTTGCCGTGGCGCGCAATGCTGCCCGCTACGAGGTGAAAGCCAAGTTCCGCACCTGGCTGTTCACCCTGGCGCACCACCGGCTGGTGGACCACCTGCGCACCGCCAGGCACCACACCAGCCTGGATGCGAGCGACGACGATGCGCGCAGGCTGGCCGACACACTGGTGGCCGACTCGGGCTTTGGGCCCGTGCGGCAACTACAGTCGCGCGAACAAGCGGCCGCGCTGATTGCGGCGGTGGAACAGTTGCCGCTGGAGCAGCGCGAGGCCTTCCTGCTGCAGGCCGAAGGCGAGCTGGGCGTGCAGGAGATTGCCGAGGCCACCGGCGTGAATTTCGAAACCGCCAAGAGCCGCCTGCGCTACGCGCGGGCCAGCCTGCGCCAGCACCTCAAGGAGTTTGTATGA
PROTEIN sequence
Length: 205
MSPSHNARVPSTPFPATMEDSDEALMLRYAAGELGAFDVLYGRHELAVWRFVFRSVKVQAEADDLLQDVWFAVARNAARYEVKAKFRTWLFTLAHHRLVDHLRTARHHTSLDASDDDARRLADTLVADSGFGPVRQLQSREQAAALIAAVEQLPLEQREAFLLQAEGELGVQEIAEATGVNFETAKSRLRYARASLRQHLKEFV*