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scnpilot_p_inoc_scaffold_1014_17

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(15314..15490)

Top 3 Functional Annotations

Value Algorithm Source
pectic acid lyase n=1 Tax=Acidovorax radicis RepID=UPI000237558F similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 53.0
  • Bit_score: 98
  • Evalue 2.60e-18
pectic acid lyase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 58.0
  • Bit_score: 120
  • Evalue 6.90e-25
pectic acid lyase similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 53.0
  • Bit_score: 85
  • Evalue 4.90e-15

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 177
ATGGAGGCCTACCGCAGCACGCATGTGGGCGATGTGCATGACACCTCGCCCTACCCGGCCGACAACCCACCGGACATCGAGCCCTGTGTGAAGAGAGACAAGTCCCAGTTCATCGTCACCGCGGACTGGATACGGCGCATGGGCAGGCTGATCGCGTTCGTAGCGCTGGGGGCATGA
PROTEIN sequence
Length: 59
MEAYRSTHVGDVHDTSPYPADNPPDIEPCVKRDKSQFIVTADWIRRMGRLIAFVALGA*